RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 NADKO95544 446 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 IGHG3P01860 377 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 KRT14P02533 472 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 FGGP02679 453 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SERPIND1P05546 499 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SERPINA6P08185 405 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 MAOAP21397 527 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PEX19P40855 299 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 RFC3P40938 356 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC1A2P43004 574 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 MAGEA3P43357 314 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ZFP36L2P47974 494 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SSR4P51571 173 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 IST1P53990 364 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ALDH18A1P54886 795 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 CDH12P55289 794 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 HSD17B7P56937 341 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NUP107P57740 925 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 RAB8AP61006 207 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 OLR1P78380 273 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 FOLH1Q04609 750 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 TRIP13Q15645 432 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PHKG1Q16816 387 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 KRT71Q3SY84 523 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 HSP90AA5PQ58FG0 334 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NDUFAF5Q5TEU4 345 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ANKRD22Q5VYY1 191 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 MBOAT1Q6ZNC8 495 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC71Q8IV32 467 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 CA13Q8N1Q1 262 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 OR2C3Q8N628 320 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 CREB3L4Q8TEY5 395 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 WDR60Q8WVS4 1066 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC5A11Q8WWX8 675 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ATL1Q8WXF7 558 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NEIL2Q969S2 332 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PYCR2Q96C36 320 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 FBXL8Q96CD0 374 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 VMP1Q96GC9 406 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PDLIM5Q96HC4 596 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SGCZQ96LD1 299 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SERPINB12Q96P63 405 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 OR4K3Q96R72 315 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC77Q9BR77 488 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 TTYH2Q9BSA4 534 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM167BQ9BTA0 163 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NPLQ9BXD5 320 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 DEFB127Q9H1M4 99 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ZDHHC11Q9H8X9 412 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PELI2Q9HAT8 420 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 TCF7L2Q9NQB0 619 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 C20orf96Q9NUD7 363 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 FBXW2Q9UKT8 454 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ERVK-11Q9UQG0 969 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 MMACHCQ9Y4U1 282 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 MAD1L1Q9Y6D9 718 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NSD1Q96L73 2696 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 TRBV11-1A0A0K0K1C0 115 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PINLYPA6NC86 204 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MBD3L5A6NJ08 208 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 A8MUA0 341 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NPIPA2E9PIF3 369 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NPIPA3F8WFD2 350 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 SYT5O00445 386 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CLDN4O14493 209 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 DIAPH2O60879 1101 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CTNSO60931 367 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 WDR1O75083 606 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CTAG2O75638 210 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 OR2J2O76002 312 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MYO1DO94832 1006 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 GLSO94925 669 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TTC4O95801 387 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 FCGR2AP12318 317 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 KLK2P20151 261 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CNR1P21554 472 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 GSTM2P28161 218 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 HNF4AP41235 474 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 GLIPR1P48060 266 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NR0B1P51843 470 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TERF1P54274 439 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CDKN2DP55273 166 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 STXBP1P61764 594 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PPIAP62937 165 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 BTN3A2P78410 334 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 REEP5Q00765 189 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PLGLB1Q02325 96 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 POU3F1Q03052 451 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MYBPHQ13203 477 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 RUNX2Q13950 521 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 RCN2Q14257 317 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 HYAL4Q2M3T9 481 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC25A35Q3KQZ1 300 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 XKR6Q5GH73 641 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 RTL6Q6ICC9 239 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TTC27Q6P3X3 843 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 SBSNQ6UWP8 590 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ARSKQ6UWY0 536 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 IL20RBQ6UXL0 311 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms