RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 LILRA2Q8N149 483 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 CDS1Q92903 461 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 BTBD2Q9BX70 525 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 GIN1Q9NXP7 522 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 GPR52Q9Y2T5 361 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 TMED5Q9Y3A6 229 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 USF3Q68DE3 2245 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 EFNA2O43921 213 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 CNOT4O95628 575 aaKnown RBP17.16■□□□□ 0.34
COL27A1-205ENST00000485397 NTN1O95631 604 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 CHEK2O96017 543 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 TUBBP07437 444 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 ASMTP46597 345 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF117Q03924 483 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 ALKBH2Q6NS38 261 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 CBLN3Q6UW01 205 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 LRIG3Q6UXM1 1119 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 R3HCC1LQ7Z5L2 792 aaKnown RBP17.16■□□□□ 0.34
COL27A1-205ENST00000485397 STK32CQ86UX6 486 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 PRIMA1Q86XR5 153 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 OR7A2PQ8NGA2 310 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 PHOSPHO1Q8TCT1 267 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 ABHD3Q8WU67 409 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 TMEM171Q8WVE6 324 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 TWIST2Q8WVJ9 160 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 MTERF3Q96E29 417 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 TRMOQ9BU70 441 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 SRXN1Q9BYN0 137 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 FANCFQ9NPI8 374 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 ATP6V1HQ9UI12 483 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 MID2Q9UJV3 735 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 CSPG4Q6UVK1 2322 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 DNHD1Q96M86 4753 aa17.16■□□□□ 0.34
COL27A1-205ENST00000485397 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 LAMP1P11279 417 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 NID1P14543 1247 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 PSMB1P20618 241 aaKnown RBP17.15■□□□□ 0.34
COL27A1-205ENST00000485397 NR1H2P55055 460 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF844Q08AG5 666 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 MLC1Q15049 377 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 TSC22D1Q15714 1073 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF239Q16600 458 aaKnown RBP17.15■□□□□ 0.34
COL27A1-205ENST00000485397 UGT3A2Q3SY77 523 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 GTF2IRD2BQ6EKJ0 949 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 NUFIP2Q7Z417 695 aaKnown RBP17.15■□□□□ 0.34
COL27A1-205ENST00000485397 GTF2IRD2Q86UP8 949 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 FBXO27Q8NI29 283 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 STACQ99469 402 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 TMEM204Q9BSN7 226 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 PIGUQ9H490 435 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 DUSP22Q9NRW4 184 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF701Q9NV72 531 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-205ENST00000485397 TRAF6Q9Y4K3 522 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 SNX8Q9Y5X2 465 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 KCNE3Q9Y6H6 103 aa17.15■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF195O14628 629 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 HS3ST1O14792 307 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 SCAMP2O15127 329 aaKnown RBP17.14■□□□□ 0.33
COL27A1-205ENST00000485397 HSPA4LO95757 839 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 FGF4P08620 206 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 PAX1P15863 534 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 HPCAL1P37235 193 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.33
COL27A1-205ENST00000485397 TOMM34Q15785 309 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-205ENST00000485397 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-205ENST00000485397 CDC73Q6P1J9 531 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 TUSC5Q8IXB3 177 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 ZNF611Q8N823 705 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 RAB3IL1Q8TBN0 382 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 RNF128Q8TEB7 428 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 AKAP1Q92667 903 aaKnown RBP eCLIP17.14■□□□□ 0.33
COL27A1-205ENST00000485397 S100PBPQ96BU1 408 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 MECRQ9BV79 373 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 OR10A4Q9H209 315 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 PPCSQ9HAB8 311 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 CARD8Q9Y2G2 431 aa17.14■□□□□ 0.33
COL27A1-205ENST00000485397 KIAA1324LA8MWY0 1029 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 INAFM1C9JVW0 142 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 PEX11AO75192 247 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 GCM2O75603 506 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 NUDT14O95848 222 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 PABPC4LP0CB38 370 aaKnown RBP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 ATP6V1C1P21283 382 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 CCT3P49368 545 aaKnown RBP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 NDUFAF6Q330K2 333 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 TMEM176BQ3YBM2 270 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 KLHL26Q53HC5 615 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 TMEM201Q5SNT2 666 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 TFAP2EQ6VUC0 442 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 MTERF4Q7Z6M4 381 aaKnown RBP17.13■□□□□ 0.33
COL27A1-205ENST00000485397 ATP6V1C2Q8NEY4 427 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 STEAP2Q8NFT2 490 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 AGR3Q8TD06 166 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 ADAMTS15Q8TE58 950 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 OR5P2Q8WZ92 322 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 ZNF524Q96C55 264 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 REXO5Q96IC2 774 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms