RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	GALNT9	Q9HCQ5	603 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	ACKR4	Q9NPB9	350 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	ADPRHL2	Q9NX46	363 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	RPS6KA6	Q9UK32	745 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	SLC13A4	Q9UKG4	626 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	ICAM5	Q9UMF0	924 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	SNX13	Q9Y5W8	968 aa		13.99	□□□□□ -0.17
CCM2-215	ENST00000482714	TLN1	Q9Y490	2541 aa	Known RBP	13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	CFAP46	Q8IYW2	2715 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	SPTA1	P02549	2419 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714		A0A087WZY1	265 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	FAAH	O00519	579 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	HCRTR2	O43614	444 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	SORBS2	O94875	1100 aa	Known RBP	13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	STAMBP	O95630	424 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	LGI1	O95970	557 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	UQCRB	P14927	111 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	AQP1	P29972	269 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	DSCR4	P56555	118 aa	Predicted RBP	13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	NCALD	P61601	193 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	PPIA	P62937	165 aa	Known RBP	13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	PLGLB1	Q02325	96 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	SLC10A1	Q14973	349 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	CD226	Q15762	336 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	KRTCAP3	Q53RY4	240 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	MTX3	Q5HYI7	312 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	MRPL2	Q5T653	305 aa	Known RBP	13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	VRK2	Q86Y07	508 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	FAM109A	Q8N4B1	249 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	RNF148	Q8N7C7	305 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	OR2M3	Q8NG83	312 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	OR4K17	Q8NGC6	315 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	OR5W2	Q8NH69	310 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	SLC39A7	Q92504	469 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	FIG4	Q92562	907 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	ASB9	Q96DX5	294 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	GNRHR2	Q96P88	292 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	TTTY12	Q9BZ98	90 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	UBQLN3	Q9H347	655 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	AGPAT4	Q9NRZ5	378 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	USP22	Q9UPT9	525 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	C15orf41	Q9Y2V0	281 aa		13.98	□□□□□ -0.17
CCM2-215	ENST00000482714	EML6	Q6ZMW3	1958 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	ATRX	P46100	2492 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	PINLYP	A6NC86	204 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	LINC01387	J3KSC0	135 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	SUV39H1	O43463	412 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	HPN	P05981	417 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	TCN1	P20061	433 aa	Predicted RBP	13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	SRD5A2	P31213	254 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	DMTN	Q08495	405 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	CBFB	Q13951	182 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	DUSP7	Q16829	419 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	CBLL1	Q75N03	491 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	FAM162A	Q96A26	154 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	TAMM41	Q96BW9	452 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	JSRP1	Q96MG2	331 aa	Predicted RBP	13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	BARD1	Q99728	777 aa	Known RBP	13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	DSN1	Q9H410	356 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	ZDHHC11	Q9H8X9	412 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	DCAF13	Q9NV06	445 aa	Known RBP	13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	OLAH	Q9NV23	265 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	EGFL7	Q9UHF1	273 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	SAMD4A	Q9UPU9	718 aa	Known RBP	13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	CARD8	Q9Y2G2	431 aa		13.97	□□□□□ -0.17
CCM2-215	ENST00000482714	CENPVL1	A0A0U1RR11	272 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	C2orf72	A6NCS6	295 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	ANKUB1	A6NFN9	424 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	LRRC3C	A6NJW4	275 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714		G3V3Y1	287 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	GNB5	O14775	395 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	FES	P07332	822 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	ZNF24	P17028	368 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	HOXB6	P17509	224 aa	Known RBP	13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	PGC	P20142	388 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	ADH6	P28332	368 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	EIF1	P41567	113 aa	Known RBP	13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	ALDH6A1	Q02252	535 aa	Known RBP	13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	SKP2	Q13309	424 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	ZSCAN26	Q16670	478 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	CYBRD1	Q53TN4	286 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	FAM180A	Q6UWF9	173 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	ZNF836	Q6ZNA1	936 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	DHFR2	Q86XF0	187 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	CLIP4	Q8N3C7	705 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	TMEM251	Q8N6I4	163 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	FAR1	Q8WVX9	515 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	TMEM234	Q8WY98	164 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	PROX1	Q92786	737 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	NSMCE2	Q96MF7	247 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	TAAR6	Q96RI8	345 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	DNAJB12	Q9NXW2	375 aa	Known RBP	13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	MED11	Q9P086	117 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	PACSIN3	Q9UKS6	424 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	CHST2	Q9Y4C5	530 aa		13.96	□□□□□ -0.17
CCM2-215	ENST00000482714	BSN	Q9UPA5	3926 aa		13.96	□□□□□ -0.18
CCM2-215	ENST00000482714		A0A0G2JMM0	328 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714		A0A1W2PPB8	328 aa		13.95	□□□□□ -0.18

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