RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZFR2Q9UPR6 939 aaKnown RBP7.19□□□□□ -1.26
SNX13-208ENST00000482558 ENTPD4Q9Y227 616 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 B3GNT3Q9Y2A9 372 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 SLC9A8Q9Y2E8 581 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 OR1A2Q9Y585 309 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 ENTPD2Q9Y5L3 495 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 HS3ST3A1Q9Y663 406 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 NUMA1Q14980 2115 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 MYO7AQ13402 2215 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 IRGMA1A4Y4 181 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 AQP7P3A6NL99 342 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 OR5K4A6NMS3 321 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SNTNA6NMZ2 147 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 GRXCR1A8MXD5 290 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MITFO75030 526 aaPredicted RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 CLPXO76031 633 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MFN2O95140 757 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 GABARAPO95166 117 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 GBAP04062 536 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 FHP07954 510 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 HOXB2P14652 356 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 CSNK2A2P19784 350 aaPredicted RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 GSTM3P21266 225 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 HIST1H1TP22492 207 aaPredicted RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 AQP1P29972 269 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MC3RP41968 323 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MAGEA10P43363 369 aaPredicted RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 YAP1P46937 504 aaKnown RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 CRYBA2P53672 197 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SLURP1P55000 103 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 CDH12P55289 794 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 EMX1Q04741 257 aaPredicted RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 HYAL1Q12794 435 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SMAD4Q13485 552 aaKnown RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 NFATC4Q14934 902 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 C16orf72Q14CZ0 275 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SHHQ15465 462 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 CEBPEQ15744 281 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MLF2Q15773 248 aaPredicted RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 DGUOKQ16854 277 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 TIMM50Q3ZCQ8 353 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 C9orf50Q5SZB4 431 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 DCST1Q5T197 706 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 NDUFAF5Q5TEU4 345 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 PARM1Q6UWI2 310 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 FAM124AQ86V42 546 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 P2RY8Q86VZ1 359 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 AMIGO1Q86WK6 493 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 ADGRF3Q8IZF5 1079 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 IL17RCQ8NAC3 791 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 LINC01555Q8NAE3 123 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 OR2L3Q8NG85 312 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 OR52E1Q8NGJ3 308 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SUN3Q8TAQ9 357 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 NT5CQ8TCD5 201 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 FAM216AQ8WUB2 273 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SLC38A5Q8WUX1 472 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SNX33Q8WV41 574 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 FAR1Q8WVX9 515 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 LCN9Q8WX39 176 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 DNASE1L2Q92874 299 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MR1Q95460 341 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 MS4A6EQ96DS6 147 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 SLC35G5Q96KT7 338 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 AMDHD1Q96NU7 426 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 DPH7Q9BTV6 452 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 FUNDC2Q9BWH2 189 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 DGCR6LQ9BY27 220 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 S1PR5Q9H228 398 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 ANKRD19PQ9H560 264 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 HMG20AQ9NP66 347 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 ACER3Q9NUN7 267 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 CLN6Q9NWW5 311 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 TRNAU1APQ9NX07 287 aaKnown RBP7.18□□□□□ -1.26
SNX13-208ENST00000482558 SEC14L3Q9UDX4 400 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 PHF11Q9UIL8 331 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 PLAGL1Q9UM63 463 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 TESMINQ9Y4I5 508 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 KLK4Q9Y5K2 254 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 ZNF780BQ9Y6R6 833 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 A3GALT2U3KPV4 340 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 COL4A3Q01955 1670 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 BRCA2P51587 3418 aa7.18□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PR48 441 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PRV1 198 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SH3PXD2BA1X283 911 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ANHXE9PGG2 379 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 H0YC42 278 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 M0R3G1 203 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 HMGN4O00479 90 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ZW10O43264 779 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 EMC8O43402 210 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 B4GAT1O43505 415 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 CNOT3O75175 753 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 MPIG6BO95866 241 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 TBX6O95947 436 aaPredicted RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 H1F0P07305 194 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 HTR1AP08908 422 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SLC35G6P0C7Q6 338 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms