RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ZNF321PQ8N8H1 164 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 DIO2Q92813 273 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 ARHGDIGQ99819 225 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 ZNF350Q9GZX5 532 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 PIGUQ9H490 435 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 PDE7BQ9NP56 450 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 SLC13A4Q9UKG4 626 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 DIMT1Q9UNQ2 313 aaKnown RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 DUXAA6NLW8 204 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 ZNF670-ZNF695F2Z2N8 137 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 TLX2O43763 284 aaPredicted RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 FOLR1P15328 257 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 HTR2AP28223 471 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 CRYBB2P43320 205 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 RORCP51449 518 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 RUNX1T1Q06455 604 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 FAM53BQ14153 422 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 ZNF267Q14586 743 aaPredicted RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 GALNT6Q8NCL4 622 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 OR51Q1Q8NH59 317 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 RIT1Q92963 219 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 MCHR1Q99705 422 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 MESP1Q9BRJ9 268 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 SSR3Q9UNL2 185 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 GPR52Q9Y2T5 361 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 A8MUA0 341 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 PRKYO43930 277 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 SRPX2O60687 465 aaPredicted RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 CYP7B1O75881 506 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 APOL3O95236 402 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 SLC34A2O95436 690 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 HBQ1P09105 142 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 CCNYL3P0C7X3 344 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 GSTM3P21266 225 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 CD1CP29017 333 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 GIPRP48546 466 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 EMDP50402 254 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 ZNF136P52737 540 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 GINS1Q14691 196 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 C1orf94Q6P1W5 598 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 OGFOD3Q6PK18 319 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 WDR88Q6ZMY6 472 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 SAMD14Q8IZD0 417 aaPredicted RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 RCBTB1Q8NDN9 531 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 FAM174AQ8TBP5 190 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 CHAC2Q8WUX2 184 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 RBM18Q96H35 190 aaKnown RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 SDHCQ99643 169 aaPredicted RBP13.38□□□□□ -0.27
CHD3-211ENST00000481999 SLC7A7Q9UM01 511 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 ERVK-19Q9WJR5 959 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 HEATR5AQ86XA9 2040 aa13.38□□□□□ -0.27
CHD3-211ENST00000481999 RGS5O15539 181 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 RAB36O95755 333 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 RNH1P13489 461 aaKnown RBP13.37□□□□□ -0.27
CHD3-211ENST00000481999 EEF1A1P68104 462 aaKnown RBP13.37□□□□□ -0.27
CHD3-211ENST00000481999 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 NDUFAF6Q330K2 333 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 SYT14P1Q58G82 188 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 C1orf189Q5VU69 101 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 PHC2Q8IXK0 858 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 OR8D4Q8NGM9 314 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 TMCO6Q96DC7 493 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 MTHFD2LQ9H903 347 aaPredicted RBP13.37□□□□□ -0.27
CHD3-211ENST00000481999 PRTFDC1Q9NRG1 225 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 PLCL2Q9UPR0 1127 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 STX11O75558 287 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 CH25HO95992 272 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 IFNA16P05015 189 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 PRKAR1BP31321 381 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 SMSP52788 366 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 NPSR1Q6W5P4 371 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 ZNF730Q6ZMV8 503 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 SHISA6Q6ZSJ9 500 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 GDF7Q7Z4P5 450 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 NRMQ8IXM6 262 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 CDRT4Q8N9R6 151 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 SETD6Q8TBK2 473 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 TSLPQ969D9 159 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 LRR1Q96L50 414 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 BARHL1Q9BZE3 327 aa13.37□□□□□ -0.27
CHD3-211ENST00000481999 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 CDC42EP2O14613 210 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 DYRK3O43781 588 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 OR2B3O76000 313 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 NSA2O95478 260 aaKnown RBP13.36□□□□□ -0.27
CHD3-211ENST00000481999 MAP3K8P41279 467 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 COPZ1P61923 177 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 CDK5Q00535 292 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 KLHL22Q53GT1 634 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 VWA2Q5GFL6 755 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 PDZK1Q5T2W1 519 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 PRAMEF8Q5VWM4 474 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 PRAMEF7Q5VXH5 474 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms