RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 KCTD21Q4G0X4 260 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 GLIPR1L2Q4G1C9 344 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 TEX44Q53QW1 395 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 BEND3Q5T5X7 828 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 MEDAGQ5VYS4 303 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 OR4F3Q6IEY1 312 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 RUFY3Q7L099 469 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 SLC22A9Q8IVM8 553 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 ADAMTS16Q8TE57 1224 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 CNOT6LQ96LI5 555 aaKnown RBP4.08□□□□□ -1.76
UPF3B-203ENST00000478840 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 GLIPR2Q9H4G4 154 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 IKZF5Q9H5V7 419 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 METTL7AQ9H8H3 244 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 VPS37BQ9H9H4 285 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 SLC17A5Q9NRA2 495 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 IMPAD1Q9NX62 359 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
UPF3B-203ENST00000478840 PIGLQ9Y2B2 252 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 L3MBTL1Q9Y468 752 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 ALG6Q9Y672 507 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 IGHV2-70DA0A0C4DH43 119 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 LRP5LA4QPB2 252 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 SAGE2PA6NJ88 616 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 OR52A4PA6NMU1 304 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 ZNF716A6NP11 495 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 PP2D1A8MPX8 630 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 PRR23D1E9PI22 279 aaPredicted RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 PRKAB2O43741 272 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 N4BP1O75113 896 aaKnown RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 RHBDL1O75783 438 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 SERPINA3P01011 423 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 SERPINB2P05120 415 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 CD55P08174 381 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 ZNF735P0CB33 412 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 PRR23D2P0DMB1 279 aaPredicted RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 SLC2A3P11169 496 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 CDH4P55283 916 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 PUDPQ08623 228 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 ABRAXAS2Q15018 415 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 SLC15A2Q16348 729 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 SLC25A52Q3SY17 297 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 KLHL22Q53GT1 634 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 NHLRC3Q5JS37 347 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 KCNIP4Q6PIL6 250 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 DOK6Q6PKX4 331 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 METAP1DQ6UB28 335 aaPredicted RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 REG3GQ6UW15 175 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 NBPF5PQ86XG9 351 aaPredicted RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 CLEC4FQ8N1N0 589 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 Q8N9G6 341 aaPredicted RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 OR5L2Q8NGL0 311 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 OR4Q3Q8NH05 313 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 TFB1MQ8WVM0 346 aaKnown RBP4.07□□□□□ -1.76
UPF3B-203ENST00000478840 C18orf12Q96KH6 178 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 PLIN2Q99541 437 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 TM2D1Q9BX74 207 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 MCCC2Q9HCC0 563 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 IL36GQ9NZH8 169 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 ADAM28Q9UKQ2 775 aa4.07□□□□□ -1.76
UPF3B-203ENST00000478840 CTAGE15A4D2H0 777 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 ZNF840PA6NDX5 716 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 SGK1O00141 431 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 TIMM8AO60220 97 aaPredicted RBP4.06□□□□□ -1.76
UPF3B-203ENST00000478840 LRATO95237 230 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 TSPAN12O95859 305 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 ALPIP09923 528 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 HSMCR30P0CW71 290 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 HOXB6P17509 224 aaKnown RBP4.06□□□□□ -1.76
UPF3B-203ENST00000478840 MX1P20591 662 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 CYP2B6P20813 491 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 IMPDH1P20839 514 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 UGT1A5P35504 534 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 ACVR1BP36896 505 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 VLDLRP98155 873 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 LTB4RQ15722 352 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 PPP1R3AQ16821 1122 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 VITQ6UXI7 678 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 NANOGNBQ7Z5D8 188 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 CTAGE6Q86UF2 777 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 CDR2LQ86X02 465 aaPredicted RBP4.06□□□□□ -1.76
UPF3B-203ENST00000478840 FGFRL1Q8N441 504 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 MFSD9Q8NBP5 474 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 C17orf47Q8NEP4 570 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 OR52K2Q8NGK3 314 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 SCFD1Q8WVM8 642 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 RPRD1AQ96P16 312 aaPredicted RBP4.06□□□□□ -1.76
UPF3B-203ENST00000478840 OR5B2Q96R09 309 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 PSMB7Q99436 277 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 NXF5Q9H1B4 397 aaKnown RBP4.06□□□□□ -1.76
UPF3B-203ENST00000478840 ADNPQ9H2P0 1102 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 GNB4Q9HAV0 340 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 ONECUT1Q9UBC0 465 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 MEMO1Q9Y316 297 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 AK6Q9Y3D8 172 aaKnown RBP4.06□□□□□ -1.76
UPF3B-203ENST00000478840 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
UPF3B-203ENST00000478840 TCF20Q9UGU0 1960 aaKnown RBP4.05□□□□□ -1.76
UPF3B-203ENST00000478840 FAM47DPA6NHR8 397 aa4.05□□□□□ -1.76
UPF3B-203ENST00000478840 F5H6K3 240 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 449 ms