RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GALNT17Q6IS24 598 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 SERINC5Q86VE9 423 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC110Q8TBZ0 833 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 PHOSPHO2Q8TCD6 241 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 C16orf45Q96MC5 204 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 TCEANC2Q96MN5 208 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 ST6GALNAC5Q9BVH7 336 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 TUBB1Q9H4B7 451 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 PSTPIP2Q9H939 334 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 LIN28AQ9H9Z2 209 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 ROPN1Q9HAT0 212 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 C6orf50Q9HD87 102 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 ANKMY1Q9P2S6 941 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 AURKCQ9UQB9 309 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 DDX49Q9Y6V7 483 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 U3KQV3 271 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 FANCMQ8IYD8 2048 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 KIAA1549LQ6ZVL6 1849 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 PATJQ8NI35 1801 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 ATP8B3O60423 1300 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 NRCAMQ92823 1304 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 GREB1Q4ZG55 1949 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MYO7AQ13402 2215 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SZT2Q5T011 3432 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 IGLV3-22A0A075B6J6 115 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 IGKV6D-21A0A0A0MT36 114 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 NPIPA5A0A0B4J1W7 369 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MBLAC1A4D2B0 266 aaPredicted RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SMCO2A6NFE2 343 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 NPIPA5E9PKD4 350 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 PDXKO00764 312 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 CYB561D2O14569 222 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 AKR7A3O95154 331 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 HCKP08631 526 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 IQCF3P0C7M6 154 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SMIM10L2AP0DMW4 78 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SMIM10L2BP0DMW5 78 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 GCFC2P16383 781 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 DESP17661 470 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 TRIM23P36406 574 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 CAPGP40121 348 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 RIDAP52758 137 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MGAT3Q09327 533 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 ORC2Q13416 577 aaPredicted RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SIX1Q15475 284 aaPredicted RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SNAI3Q3KNW1 292 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 GLIPR1L2Q4G1C9 344 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 CEP55Q53EZ4 464 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 AGAP7PQ5VUJ5 663 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 ARSKQ6UWY0 536 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC71Q8IV32 467 aaPredicted RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 DEFB123Q8N688 67 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZBTB44Q8NCP5 570 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 OR52B4Q8NGK2 314 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 WDR36Q8NI36 951 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MIPOL1Q8TD10 442 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 PRUNE2Q8WUY3 3088 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SLC25A36Q96CQ1 311 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MBOAT7Q96N66 472 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 HSD17B14Q9BPX1 270 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 CHCHD5Q9BSY4 110 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 LRRC61Q9BV99 259 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 SP140LQ9H930 580 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 GTSE1Q9NYZ3 720 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MBD2Q9UBB5 411 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MUTYHQ9UIF7 546 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 PURGQ9UJV8 347 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 EMCNQ9ULC0 261 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 MGAT4BQ9UQ53 548 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 REV3LO60673 3130 aa3.23□□□□□ -1.89
CDC42BPA-212ENST00000478573 COL6A3P12111 3177 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 MYO16Q9Y6X6 1858 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ABCA7Q8IZY2 2146 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 FAM230AA0A1W2PPH8 454 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 GSTTP1A0A1W2PQM5 241 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 RNF222A6NCQ9 220 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 A8MXK9 166 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 K7EPI3 171 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 LGALS8O00214 317 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CPLX1O14810 134 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CHADO15335 359 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CFLARO15519 480 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CLDN3O15551 220 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 PFKFB2O60825 505 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 TOXO94900 526 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 APBB3O95704 486 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 POP4O95707 220 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 GSTA1P08263 222 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 OR9G9P0C7N8 305 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 RRASP10301 218 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CYP11B1P15538 503 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 LMO2P25791 158 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ACAA2P42765 397 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCL23P55773 120 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 KRTAP12-2P59991 146 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 HERVK_113P63132 956 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ERVK-8P63133 956 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 PRKCEQ02156 737 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms