RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 FGFBP1Q14512 234 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 ARHGAP11BQ3KRB8 267 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 SPANXN4Q5MJ08 99 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 WDR75Q8IWA0 830 aaKnown RBP21.06■□□□□ 0.96
C9orf3-215ENST00000478473 OR5D16Q8NGK9 328 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 POC1BQ8TC44 478 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 CHMP6Q96FZ7 201 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 CCDC115Q96NT0 180 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 RBM24Q9BX46 236 aaKnown RBP21.06■□□□□ 0.96
C9orf3-215ENST00000478473 BTNL2Q9UIR0 455 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 DTNAQ9Y4J8 743 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 GPR45Q9Y5Y3 372 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 RNF103-CHMP3A0A140T963 221 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 A6NNC1 897 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 SHISA8B8ZZ34 492 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 H3BNH8 94 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 SEC14L5O43304 696 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 AGR2O95994 175 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 CGAP01215 116 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 FCGR2AP12318 317 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ELK4P28324 431 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 P2RX1P51575 399 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ZNF41P51814 821 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-215ENST00000478473 PON3Q15166 354 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ZNF141Q15928 474 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 SAXO2Q658L1 398 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 CBLN3Q6UW01 205 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ESPNLQ6ZVH7 1005 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 P4HA3Q7Z4N8 544 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 TMEM200AQ86VY9 491 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 TOR1AIP2Q8NFQ8 470 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 FNDC9Q8TBE3 224 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 PHOSPHO1Q8TCT1 267 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ARSGQ96EG1 525 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 NEURL3Q96EH8 262 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ZNF845Q96IR2 970 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-215ENST00000478473 TEX37Q96LM6 180 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 ZNF350Q9GZX5 532 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 MANSC1Q9H8J5 431 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 GALNT8Q9NY28 637 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 NKIRAS1Q9NYS0 192 aa21.05■□□□□ 0.96
C9orf3-215ENST00000478473 STX11O75558 287 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 NTN1O95631 604 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 CD8BP10966 210 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 NID1P14543 1247 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 SOAT1P35610 550 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 LRRC74AQ0VAA2 488 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 FAM174BQ3ZCQ3 159 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 SLC25A53Q5H9E4 307 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 AGBL2Q5U5Z8 902 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 OR4A15Q8NGL6 344 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 SH3YL1Q96HL8 342 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-215ENST00000478473 SLC35G5Q96KT7 338 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 RNF145Q96MT1 663 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 DACH2Q96NX9 599 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 SAP130Q9H0E3 1048 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 POLE3Q9NRF9 147 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 MPDZO75970 2070 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 CELSR1Q9NYQ6 3014 aa21.04■□□□□ 0.96
C9orf3-215ENST00000478473 OIP5O43482 229 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 GMFGO60234 142 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 EIF4E2O60573 245 aaKnown RBP21.03■□□□□ 0.96
C9orf3-215ENST00000478473 S100A3P33764 101 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 UFM1P61960 85 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 RPS26P62854 115 aaKnown RBP21.03■□□□□ 0.96
C9orf3-215ENST00000478473 VWA1Q6PCB0 445 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 SPNS3Q6ZMD2 512 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 BTLAQ7Z6A9 289 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 CLEC4FQ8N1N0 589 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 GLB1L3Q8NCI6 653 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-215ENST00000478473 GPR119Q8TDV5 335 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 WDR55Q9H6Y2 383 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-215ENST00000478473 DNAJB12Q9NXW2 375 aaKnown RBP21.03■□□□□ 0.96
C9orf3-215ENST00000478473 KCNE5Q9UJ90 142 aa21.03■□□□□ 0.96
C9orf3-215ENST00000478473 GPC6Q9Y625 555 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-215ENST00000478473 NPIPA5A0A0B4J1W7 369 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 NPIPA7E9PJI5 369 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 ZNF195O14628 629 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 FCMRO60667 390 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 AQP8O94778 261 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 NPIPA8P0DM63 369 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 IL11P20809 199 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 EPHA3P29320 983 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 IL12AP29459 219 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 TXNL4AP83876 142 aaKnown RBP21.02■□□□□ 0.96
C9orf3-215ENST00000478473 LUZP2Q86TE4 346 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 ANKRD46Q86W74 232 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 OR10D3Q8NH80 312 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 MGARPQ8TDB4 240 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 OR51I1Q9H343 314 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 EXD2Q9NVH0 621 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 CARD8Q9Y2G2 431 aa21.02■□□□□ 0.96
C9orf3-215ENST00000478473 HRNRQ86YZ3 2850 aaPredicted RBP21.02■□□□□ 0.95
C9orf3-215ENST00000478473 ABCA4P78363 2273 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 A0A0J9YW62 118 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 SERINC4A6NH21 518 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 EIF1AYO14602 144 aaKnown RBP21.01■□□□□ 0.95
C9orf3-215ENST00000478473 ZNF264O43296 627 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 EFNA2O43921 213 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 UGT2B17O75795 530 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms