RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CARD8Q9Y2G2 431 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 LRIT2A6NDA9 550 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 AP1G1O43747 822 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 OPRL1P41146 370 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 MAGEA8P43361 318 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 SYT14Q8NB59 555 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 NDNFQ8TB73 568 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 FCAMRQ8WWV6 532 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 PMM1Q92871 262 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 BCL7BQ9BQE9 202 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 NAA11Q9BSU3 229 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 PFDN2Q9UHV9 154 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 SMAD9O15198 467 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 RAB40BQ12829 278 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 SNTB2Q13425 540 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 PGGHGQ32M88 737 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 ABHD17BQ5VST6 288 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 PLAC1Q9HBJ0 212 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 THSD1Q9NS62 852 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 C2orf42Q9NWW7 574 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 CNOT2Q9NZN8 540 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 CCDC59Q9P031 241 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 MBD2Q9UBB5 411 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 NOP16Q9Y3C1 178 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF701M0R085 212 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 BRINP1O60477 761 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 S100A1P23297 94 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 RACK1P63244 317 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 NHSL2Q5HYW2 709 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 IQCF2Q8IXL9 164 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 EID2Q8N6I1 236 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 OR14L1PQ8NHC6 308 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 ELP4Q96EB1 424 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 LMF2Q9BU23 707 aaKnown RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 ATG5Q9H1Y0 275 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 OLAHQ9NV23 265 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 SH2B3Q9UQQ2 575 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 HS3ST3A1Q9Y663 406 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 CROCCQ5TZA2 2017 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 A8MV72 311 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 FAM227AF5H4B4 570 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 RLN2P04090 185 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 STOMP27105 288 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF181Q2M3W8 571 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 PGBD2Q6P3X8 592 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-208ENST00000478423 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
NPHP4-208ENST00000478423 ITGB8P26012 769 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 RGS6P49758 472 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TSPAN31Q12999 210 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 NR0B2Q15466 257 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 SLC25A25Q6KCM7 469 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 CCDC80Q76M96 950 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 NLGN4YQ8NFZ3 816 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-208ENST00000478423 GRPEL2Q8TAA5 225 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 DDIT4LQ96D03 193 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 MRGPRX1Q96LB2 322 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 MED11Q9P086 117 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 CAPNS1P04632 268 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 KIAA1024LP59773 190 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 ZP2Q05996 745 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 DLX2Q07687 328 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TBCEQ15813 527 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TBPL2Q6SJ96 375 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 LRRN1Q6UXK5 716 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 OR6T1Q8NGN1 323 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 GGHQ92820 318 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 EDAQ92838 391 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 OR5B2Q96R09 309 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 CLCC1Q96S66 551 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TMEM38AQ9H6F2 299 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 CD93Q9NPY3 652 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 NDUFAF4Q9P032 175 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 HSPB11Q9Y547 144 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 TVP23AA6NH52 213 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 FXYD1O00168 92 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 RBMS1P29558 406 aaKnown RBP13.28□□□□□ -0.28
NPHP4-208ENST00000478423 ARPC4P59998 168 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 DUSP7Q16829 419 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 RABEPKQ7Z6M1 372 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 UEVLDQ8IX04 471 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 ACOT12Q8WYK0 555 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 VN1R3Q9BXE9 311 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 OR51B4Q9Y5P0 310 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 CEPT1Q9Y6K0 416 aa13.28□□□□□ -0.28
NPHP4-208ENST00000478423 FXYD6-FXYD2A0A087WZ82 144 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 LRRTM2O43300 516 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 OPN1LWP04000 364 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 UCHL1P09936 223 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 GTF2F2P13984 249 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 CD27P26842 260 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.28
NPHP4-208ENST00000478423 PRKCDQ05655 676 aa13.27□□□□□ -0.28
NPHP4-208ENST00000478423 CCDC36Q8IYA8 594 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms