RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MBD3L5A6NJ08 208 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 LINC01387J3KSC0 135 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 KIAA0513O60268 411 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 UGT2B17O75795 530 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ANP32DO95626 131 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 KRT75O95678 551 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 SNRPB2P08579 225 aaKnown RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ZCCHC18P0CG32 403 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 CD1EP15812 388 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF41P51814 821 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 SUCLG1P53597 346 aaKnown RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 CLDN20P56880 219 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 TFF3Q07654 80 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF141Q15928 474 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 MAPK14Q16539 360 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 PLPPR5Q32ZL2 321 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 GPAT3Q53EU6 434 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 TYW3Q6IPR3 259 aaKnown RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 BLOC1S3Q6QNY0 202 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 FRRS1Q6ZNA5 592 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 GTPBP8Q8N3Z3 284 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 MEIOBQ8N635 442 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ARFGAP2Q8N6H7 521 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ANKFN1Q8N957 763 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 MBD3L2Q8NHZ7 208 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 STON2Q8WXE9 905 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 SMPDL3BQ92485 455 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ZG16BQ96DA0 208 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 AURKBQ96GD4 344 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 SAP130Q9H0E3 1048 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 POLE3Q9NRF9 147 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 ICAM5Q9UMF0 924 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 WDR45Q9Y484 360 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 NR5A2O00482 541 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 SEC14L5O43304 696 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 HNRNPRO43390 633 aaKnown RBP14.06□□□□□ -0.16
HMGA1-206ENST00000478214 H6PDO95479 791 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 IL2RAP01589 272 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 GUSBP08236 651 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 LINGO3P0C6S8 592 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 UBL4AP11441 157 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF17P17021 662 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 NCF2P19878 526 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-206ENST00000478214 ANXA11P50995 505 aaKnown RBP14.06□□□□□ -0.16
HMGA1-206ENST00000478214 ATP4BP51164 291 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 P2RX1P51575 399 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF136P52737 540 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 MVDP53602 400 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 TXNL4AP83876 142 aaKnown RBP14.06□□□□□ -0.16
HMGA1-206ENST00000478214 CHRNEQ04844 493 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 SQLEQ14534 574 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 SYPL1Q16563 259 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 AGKQ53H12 422 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 HMGN2P46Q86SG4 172 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 POC1BQ8TC44 478 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 MARVELD3Q96A59 401 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 ZBTB8AQ96BR9 441 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 SPDL1Q96EA4 605 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 RNF145Q96MT1 663 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 UCN2Q96RP3 112 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 PAIP1Q9H074 479 aaKnown RBP14.06□□□□□ -0.16
HMGA1-206ENST00000478214 TPT1P8Q9HAU6 139 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 SLC52A3Q9NQ40 469 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 NPDC1Q9NQX5 325 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-206ENST00000478214 CLCF1Q9UBD9 225 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 LIPT1Q9Y234 373 aa14.06□□□□□ -0.16
HMGA1-206ENST00000478214 KIAA1549Q9HCM3 1950 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 PKDREJQ9NTG1 2253 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 A0A0G2JND7 137 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 C7orf72A4D263 438 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF264O43296 627 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 EIF4E2O60573 245 aaKnown RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 CYP7B1O75881 506 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 NUDT14O95848 222 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 TGM6O95932 706 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 CHRM4P08173 479 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 ETFAP13804 333 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 COX6B1P14854 86 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 CAPN3P20807 821 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 BMP5P22003 454 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 PSMA4P25789 261 aaKnown RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 AGFG1P52594 562 aaKnown RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 HPCAP84074 193 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 GUCY1A3Q02108 690 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 TOMM34Q15785 309 aaPredicted RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 SLC25A35Q3KQZ1 300 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 AP1ARQ63HQ0 302 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 POMZP3Q6PJE2 187 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF619Q8N2I2 560 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 TMCO5AQ8N6Q1 288 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 RELL2Q8NC24 303 aaPredicted RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 GPR119Q8TDV5 335 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 WNT2BQ93097 391 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 ZNF524Q96C55 264 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 ARSGQ96EG1 525 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 TRNT1Q96Q11 434 aaKnown RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 SIKE1Q9BRV8 207 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 QRSL1Q9H0R6 528 aaKnown RBP14.05□□□□□ -0.16
HMGA1-206ENST00000478214 SLC38A1Q9H2H9 487 aa14.05□□□□□ -0.16
HMGA1-206ENST00000478214 MED4Q9NPJ6 270 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms