RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CNOT9Q92600 299 aaKnown RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 CLPTM1LQ96KA5 538 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 JSRP1Q96MG2 331 aaPredicted RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 ZNF607Q96SK3 696 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 RLIMQ9NVW2 624 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 CARD8Q9Y2G2 431 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 IFT52Q9Y366 437 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 PRRC2CQ9Y520 2896 aaKnown RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 CXCR6O00574 342 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 ZNF264O43296 627 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 TPST1O60507 370 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 ADAM11O75078 769 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 SERPINB7O75635 380 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 PDE5AO76074 875 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 OPN1SWP03999 348 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 ZNF24P17028 368 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 TCN1P20061 433 aaPredicted RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 KDELR2P33947 212 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 MSX2P35548 267 aaPredicted RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 LARS2Q15031 903 aaKnown RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 GLIPR1L2Q4G1C9 344 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 ZNF311Q5JNZ3 666 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 PGM2L1Q6PCE3 622 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 CCDC121Q6ZUS5 278 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 ARMC8Q8IUR7 673 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 GRAMD2AQ8IUY3 354 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 CLIP4Q8N3C7 705 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 CISD2Q8N5K1 135 aaKnown RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 TNIP2Q8NFZ5 429 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 SNRNP40Q96DI7 357 aaKnown RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 SPATA5L1Q9BVQ7 753 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 CADM1Q9BY67 442 aaKnown RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 LAT2Q9GZY6 243 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 DSN1Q9H410 356 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 ZDHHC11Q9H8X9 412 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 HHATLQ9HCP6 504 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 EXOSC3Q9NQT5 275 aaKnown RBP18.15■□□□□ 0.5
ACTB-210ENST00000477812 MED11Q9P086 117 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 EGFL7Q9UHF1 273 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 NCKAP5O14513 1909 aa18.15■□□□□ 0.5
ACTB-210ENST00000477812 FAM166BA8MTA8 275 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 HCRTR2O43614 444 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 EIF4E2O60573 245 aaKnown RBP18.14■□□□□ 0.49
ACTB-210ENST00000477812 WISP2O76076 250 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 CELA3AP09093 270 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 UBTFL6P0CB48 400 aaPredicted RBP18.14■□□□□ 0.49
ACTB-210ENST00000477812 NCK1P16333 377 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 MSX1P28360 303 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 RASSF2P50749 326 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 SUMO3P55854 103 aaPredicted RBP18.14■□□□□ 0.49
ACTB-210ENST00000477812 PPIAP62937 165 aaKnown RBP18.14■□□□□ 0.49
ACTB-210ENST00000477812 PLGLB1Q02325 96 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 ASRGL1Q7L266 308 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 SLC22A16Q86VW1 577 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 FAM109AQ8N4B1 249 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 TOR1AIP2Q8NFQ8 470 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 B4GALNT2Q8NHY0 566 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 FIG4Q92562 907 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 ZNF524Q96C55 264 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 ARSGQ96EG1 525 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 SH3YL1Q96HL8 342 aaPredicted RBP18.14■□□□□ 0.49
ACTB-210ENST00000477812 THTPAQ9BU02 230 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 PINK1Q9BXM7 581 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 SEC14L3Q9UDX4 400 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 ZNF232Q9UNY5 417 aa18.14■□□□□ 0.49
ACTB-210ENST00000477812 GSC2O15499 205 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 CBR3O75828 277 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 DNAJC8O75937 253 aaPredicted RBP18.13■□□□□ 0.49
ACTB-210ENST00000477812 C1QL1O75973 258 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 CRYABP02511 175 aaKnown RBP18.13■□□□□ 0.49
ACTB-210ENST00000477812 MST1P26927 711 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 MAGEA5P43359 124 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 KCNJ5P48544 419 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 DUSP7Q16829 419 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 ZSWIM7Q19AV6 140 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 CMPK2Q5EBM0 449 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 FAM180AQ6UWF9 173 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 SMYD1Q8NB12 490 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 OR4K17Q8NGC6 315 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 C1GALT1C1Q96EU7 318 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 PCDHAC1Q9H158 963 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 QPCTLQ9NXS2 382 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 B4GALT7Q9UBV7 327 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 SNX13Q9Y5W8 968 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 PCNX3Q9H6A9 2034 aa18.13■□□□□ 0.49
ACTB-210ENST00000477812 HEATR5AQ86XA9 2040 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 ANKUB1A6NFN9 424 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 ACOT7O00154 380 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 GTPBP1O00178 669 aaKnown RBP18.12■□□□□ 0.49
ACTB-210ENST00000477812 SYT5O00445 386 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 ARPC2O15144 300 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 GSTA4O15217 222 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 HPNP05981 417 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 P2RX1P51575 399 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 BNIP2Q12982 314 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 ELOAQ14241 798 aaKnown RBP18.12■□□□□ 0.49
ACTB-210ENST00000477812 LRRC23Q53EV4 343 aaPredicted RBP18.12■□□□□ 0.49
ACTB-210ENST00000477812 CYBRD1Q53TN4 286 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 BHLHE22Q8NFJ8 381 aaPredicted RBP18.12■□□□□ 0.49
ACTB-210ENST00000477812 OR5W2Q8NH69 310 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms