RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MYO9AB2RTY4 2548 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 SVILO95425 2214 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 CLDN24A6NM45 220 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 FAM166BA8MTA8 275 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 GMFGO60234 142 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 SERPINB7O75635 380 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 CSTAP01040 98 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 NCK1P16333 377 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZNF24P17028 368 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 CCR4P51679 360 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZNF117Q03924 483 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 C17orf67Q0P5P2 114 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 FOXO1Q12778 655 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 INPP5JQ15735 1006 aaPredicted RBP13.97□□□□□ -0.17
SEC13-215ENST00000477547 EIPR1Q53HC9 387 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZNF311Q5JNZ3 666 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 AP1ARQ63HQ0 302 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 OR5M10Q6IEU7 315 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 RPUSD3Q6P087 351 aaKnown RBP13.97□□□□□ -0.17
SEC13-215ENST00000477547 FAM180AQ6UWF9 173 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 CCDC80Q76M96 950 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 EIF3MQ7L2H7 374 aaKnown RBP13.97□□□□□ -0.17
SEC13-215ENST00000477547 ARMC8Q8IUR7 673 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZFP62Q8NB50 900 aaPredicted RBP13.97□□□□□ -0.17
SEC13-215ENST00000477547 OR4K17Q8NGC6 315 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 OR1J4Q8NGS1 313 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 MCUR1Q96AQ8 359 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 TAMM41Q96BW9 452 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 NTNG2Q96CW9 530 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 LRMDAQ9H2I8 198 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZNF703Q9H7S9 590 aaPredicted RBP13.97□□□□□ -0.17
SEC13-215ENST00000477547 HHATLQ9HCP6 504 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZFP64Q9NPA5 681 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.97□□□□□ -0.17
SEC13-215ENST00000477547 CD300AQ9UGN4 299 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 MAGEL2Q9UJ55 1249 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 C15orf41Q9Y2V0 281 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 IFT52Q9Y366 437 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 ZNF407Q9C0G0 2248 aa13.97□□□□□ -0.17
SEC13-215ENST00000477547 NOTCH2Q04721 2471 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 GTPBP1O00178 669 aaKnown RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 ARPC2O15144 300 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 ZNF264O43296 627 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 OIP5O43482 229 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 HCRTR2O43614 444 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 GCM2O75603 506 aaPredicted RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 CYP7B1O75881 506 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 DNAJC8O75937 253 aaPredicted RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 UBTFL6P0CB48 400 aaPredicted RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 GGT1P19440 569 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 ENDOUP21128 410 aaKnown RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 GDF1P27539 372 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 EEF1A1P68104 462 aaKnown RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 KCNJ10P78508 379 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 PLAURQ03405 335 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 BNIP2Q12982 314 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 SKP2Q13309 424 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 TIGD3Q6B0B8 471 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 PLCZ1Q86YW0 608 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 CMIPQ8IY22 773 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 FAM71CQ8NEG0 241 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 FAM162AQ96A26 154 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 CLPTM1LQ96KA5 538 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 CARD8Q9Y2G2 431 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 SNX13Q9Y5W8 968 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 DNAJC13O75165 2243 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 USP9YO00507 2555 aaPredicted RBP13.96□□□□□ -0.17
SEC13-215ENST00000477547 NBASA2RRP1 2371 aa13.96□□□□□ -0.17
SEC13-215ENST00000477547 MPDZO75970 2070 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 IGLV3-32A0A0A0MS00 114 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 CLEC18AA5D8T8 446 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 B4DXG7 233 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 M0QX08 132 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 BCAS1O75363 584 aaPredicted RBP13.95□□□□□ -0.18
SEC13-215ENST00000477547 GMNNO75496 209 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 MFN2O95140 757 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 PRKAR1BP31321 381 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 MSX2P35548 267 aaPredicted RBP13.95□□□□□ -0.18
SEC13-215ENST00000477547 PGM1P36871 562 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 CRYBA2P53672 197 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 DMTNQ08495 405 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 FXNQ16595 210 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 PRR30Q53SZ7 412 aaPredicted RBP13.95□□□□□ -0.18
SEC13-215ENST00000477547 DHRS4L2Q6PKH6 230 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 CLEC18BQ6UXF7 455 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 SLC22A16Q86VW1 577 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 TMEM251Q8N6I4 163 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 FADS6Q8N9I5 356 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 WDSUB1Q8N9V3 476 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 SMYD1Q8NB12 490 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 CLEC18CQ8NCF0 446 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 OR2M3Q8NG83 312 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 B4GALNT2Q8NHY0 566 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 DUSP19Q8WTR2 217 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 PSMG3-AS1Q96PY0 264 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 TAAR6Q96RI8 345 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms