RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.38□□□□□ -1.87
UBR3-209ENST00000477461 RAB7BQ96AH8 199 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CLDN23Q96B33 292 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 SPSB1Q96BD6 273 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 LRRC39Q96DD0 335 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CFAP36Q96G28 342 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 FAM71F1Q96KD3 344 aaPredicted RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 CNDP2Q96KP4 475 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 SERPINB12Q96P63 405 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 NAT9Q9BTE0 207 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 LRRC61Q9BV99 259 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 PARD6BQ9BYG5 372 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 IL22Q9GZX6 179 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 SHARPINQ9H0F6 387 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 RSPH9Q9H1X1 276 aaPredicted RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 TRABDQ9H4I3 376 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CHST11Q9NPF2 352 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 GSN-AS1Q9NRJ2 163 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 FBXL12Q9NXK8 326 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 PKD2L2Q9NZM6 624 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 OR6C2Q9NZP2 312 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CHMP2BQ9UQN3 213 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 WDR83OSQ9Y284 106 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 MTF2Q9Y483 593 aaPredicted RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 MKI67P46013 3256 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 MYLKQ15746 1914 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 TECTAO75443 2155 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CHD9Q3L8U1 2897 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 NCOR1O75376 2440 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 A0A087WV48 116 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TSPAN11A1L157 253 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SHISA7A6NL88 538 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 A8MX80 341 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 H7C0S8 307 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 PFDN6O15212 129 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SLC7A4O43246 635 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SPAG6O75602 509 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TM7SF2O76062 418 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TTC4O95801 387 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 PDGFBP01127 241 aaPredicted RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 GSTA2P09210 222 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 ALPIP09923 528 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 ADRB3P13945 408 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 GABRG2P18507 467 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 PGAM1P18669 254 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 AOC1P19801 751 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 JAK1P23458 1154 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 P2RY2P41231 377 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 ELK3P41970 407 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 GRIA1P42261 906 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 MAGEA4P43358 317 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CCR10P46092 362 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TPMTP51580 245 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 VSNL1P62760 191 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 DLK1P80370 383 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SGCGQ13326 291 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 POU6F1Q14863 301 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TAF1AQ15573 450 aaPredicted RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 TRADDQ15628 312 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TAF1BQ53T94 588 aaPredicted RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 LRRC73Q5JTD7 316 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SPANXN3Q5MJ09 141 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 C6orf136Q5SQH8 315 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 ARMC3Q5W041 872 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 LRRC66Q68CR7 880 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 UGT3A1Q6NUS8 523 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 EMBQ6PCB8 327 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SLC25A47Q6Q0C1 308 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 HOGA1Q86XE5 327 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CDK20Q8IZL9 346 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 RASGEF1AQ8N9B8 481 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CAMKVQ8NCB2 501 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 FBXO36Q8NEA4 188 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 OR13C3Q8NGS6 347 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 BRSK1Q8TDC3 778 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 UBLCP1Q8WVY7 318 aaPredicted RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 PIH1D2Q8WWB5 315 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CDKL2Q92772 493 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TADA1Q96BN2 335 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CENPTQ96BT3 561 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 ECHDC3Q96DC8 303 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 THOC1Q96FV9 657 aaKnown RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 ZNF414Q96IQ9 312 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 C9orf72Q96LT7 481 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 RMDN2Q96LZ7 410 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 C10orf90Q96M02 699 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TTC25Q96NG3 672 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 FOXN4Q96NZ1 517 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 TRIB3Q96RU7 358 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 RANBP9Q96S59 729 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 EBNA1BP2Q99848 306 aaKnown RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 SOSTQ9BQB4 213 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 CCDC77Q9BR77 488 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 GPATCH1Q9BRR8 931 aaKnown RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 NAA11Q9BSU3 229 aaPredicted RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 WRAP53Q9BUR4 548 aaKnown RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 NEUROG2Q9H2A3 272 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 VPS37BQ9H9H4 285 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 SGK2Q9HBY8 427 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms