RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PKLRP30613 574 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 MAP3K8P41279 467 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 MAGEA2P43356 314 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 CTXN1P60606 82 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 PPP3R1P63098 170 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.763e-11■□□□□ 11.1
COL27A1-204ENST00000477421 RAB40BQ12829 278 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 ALG11Q2TAA5 492 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SAXO2Q658L1 398 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SFRP4Q6FHJ7 346 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 LEG1Q6P5S2 330 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF627Q7L945 461 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 OR7G2Q8NG99 324 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 RSC1A1Q92681 617 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 C4orf36Q96KX1 117 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TNFRSF13CQ96RJ3 184 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 FUZQ9BT04 418 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 CPNE5Q9HCH3 593 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 WSB2Q9NYS7 404 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF638Q14966 1978 aaKnown RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TRBV5-3A0A0A0MS03 114 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 GPR89AB7ZAQ6 455 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 MAGEB4O15481 346 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 GPR89BP0CG08 455 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TPMTP51580 245 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 NR0B1P51843 470 aaKnown RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TRA2BP62995 288 aaKnown RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 C11orf91Q3C1V1 193 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 HSD17B12Q53GQ0 312 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 HES5Q5TA89 166 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF793Q6ZN11 406 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 NUP54Q7Z3B4 507 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 GPAT4Q86UL3 456 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 MFSD9Q8NBP5 474 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 OR52I1Q8NGK6 324 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 DYNC2LI1Q8TCX1 351 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 RFT1Q96AA3 541 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF559Q9BR84 538 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SLC25A18Q9H1K4 315 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SLC2A4RGQ9NR83 387 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TXNL4BQ9NX01 149 aaKnown RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SIDT1Q9NXL6 827 aaKnown RBP10.29□□□□□ -0.76
COL27A1-204ENST00000477421 ADAM29Q9UKF5 820 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 METTL15A6NJ78 407 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MAN2B1O00754 1011 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 PTTG1O95997 202 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MAS1P04201 325 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 F13BP05160 661 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 TACSTD2P09758 323 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ACP2P11117 423 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 IL7P13232 177 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 PRPH2P23942 346 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 TEAD1P28347 426 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ETV5P41161 510 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 SLC1A3P43003 542 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 RABIFP47224 123 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ETV1P50549 477 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 TNFRSF17Q02223 184 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 CRMP1Q14194 572 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MFSD12Q6NUT3 480 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 KRT77Q7Z794 578 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ADGRF3Q8IZF5 1079 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 TBC1D20Q96BZ9 403 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 SLC35A4Q96G79 324 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 LMAN1LQ9HAT1 526 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 KLRF1Q9NZS2 232 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MYEF2Q9P2K5 600 aaKnown RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF639Q9UID6 485 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 AP1M2Q9Y6Q5 423 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 PSME4Q14997 1843 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 A0A0J9YY10 115 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 C17orf105B2RV13 164 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF879B4DU55 563 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 KCNJ13O60928 360 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ITGA10O75578 1167 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 YES1P07947 543 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MLLT11Q13015 90 aaPredicted RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 SLX4IPQ5VYV7 408 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 RTL10Q7L3V2 364 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 TMPRSS12Q86WS5 348 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 NAXEQ8NCW5 288 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 OR8S1Q8NH09 359 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 NR4A3Q92570 626 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 CNOT9Q92600 299 aaKnown RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MAP3K3Q99759 626 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 G6PC3Q9BUM1 346 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 DHCR7Q9UBM7 475 aaKnown RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 SERTAD3Q9UJW9 196 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 SCN2AQ99250 2005 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF670-ZNF695F2Z2N8 137 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MRPS14O60783 128 aaKnown RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 NTN1O95631 604 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 CD3GP09693 182 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 DRD1P21728 446 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 S100A1P23297 94 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 DRD3P35462 400 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms