RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TMEM239Q8WW34 195 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 SAMD8Q96LT4 415 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 MIR1-1HGQ9H1L0 117 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 ASB6Q9NWX5 421 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 MUTYHQ9UIF7 546 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF223Q9UK11 482 aaPredicted RBP15.26■□□□□ 0.03
TMEM53-208ENST00000476724 TBC1D24Q9ULP9 559 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 TMEM5Q9Y2B1 443 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 A0A1W2PQL4 384 aaPredicted RBP15.26■□□□□ 0.03
TMEM53-208ENST00000476724 CDC42EP2O14613 210 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 DYRK3O43781 588 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 FGF17O60258 216 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 LDB3O75112 727 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 RCBTB2O95199 551 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 UBE2IP63279 158 aaKnown RBP15.26■□□□□ 0.03
TMEM53-208ENST00000476724 FABP5Q01469 135 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 BDH1Q02338 343 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 SCN1BQ07699 218 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 GPR50Q13585 617 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 MAPK14Q16539 360 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 CXXC5Q7LFL8 322 aaKnown RBP15.26■□□□□ 0.03
TMEM53-208ENST00000476724 TAF8Q7Z7C8 310 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 IL17RDQ8NFM7 739 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 OR4F15Q8NGB8 312 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 HS6ST2Q96MM7 605 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF649Q9BS31 505 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 KATNB1Q9BVA0 655 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 OR52D1Q9H346 318 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 SYNDIG1Q9H7V2 258 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 ABCB9Q9NP78 766 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 HRASLS2Q9NWW9 162 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 TOR4AQ9NXH8 423 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 SIDT1Q9NXL6 827 aaKnown RBP15.26■□□□□ 0.03
TMEM53-208ENST00000476724 MAT2BQ9NZL9 334 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 TNFRSF10DQ9UBN6 386 aa15.26■□□□□ 0.03
TMEM53-208ENST00000476724 MRPS2Q9Y399 296 aaKnown RBP15.26■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF860A6NHJ4 632 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 CD27P26842 260 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 NUDT1P36639 197 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 POU6F2P78424 691 aaPredicted RBP15.25■□□□□ 0.03
TMEM53-208ENST00000476724 ID2Q02363 134 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 RPL6Q02878 288 aaKnown RBP15.25■□□□□ 0.03
TMEM53-208ENST00000476724 DMWDQ09019 674 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF155Q12901 538 aaPredicted RBP15.25■□□□□ 0.03
TMEM53-208ENST00000476724 FAM131AQ6UXB0 335 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 SHFQ7M4L6 423 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 PARGQ86W56 976 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 CPOQ8IVL8 374 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 CA13Q8N1Q1 262 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 MAFAQ8NHW3 353 aaPredicted RBP15.25■□□□□ 0.03
TMEM53-208ENST00000476724 CTHRC1Q96CG8 243 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 SECISBP2Q96T21 854 aaKnown RBP15.25■□□□□ 0.03
TMEM53-208ENST00000476724 TM9SF2Q99805 663 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 LRRC61Q9BV99 259 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 HINT3Q9NQE9 182 aaKnown RBP15.25■□□□□ 0.03
TMEM53-208ENST00000476724 TMEM74BQ9NUR3 256 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 POLHQ9Y253 713 aa15.25■□□□□ 0.03
TMEM53-208ENST00000476724 CENPVL1A0A0U1RR11 272 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 A0A1W2PR77 199 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 FABP12A6NFH5 140 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 BRINP1O60477 761 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 GUSBP08236 651 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CLEC2LP0C7M8 214 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 IL7P13232 177 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CTSEP14091 401 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 BCKDHBP21953 392 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 PAICSP22234 425 aaKnown RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 HTR2AP28223 471 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 RNF144AP50876 292 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 RAB38P57729 211 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 MGAT2Q10469 447 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 AGAP6Q5VW22 663 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF613Q6PF04 617 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 TMPRSS11FQ6ZWK6 438 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CSNK1A1LQ8N752 337 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 FANK1Q8TC84 345 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 SLC37A2Q8TED4 501 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 DIRAS2Q96HU8 199 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 AGAP4Q96P64 663 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 MIXL1Q9H2W2 232 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 YARS2Q9Y2Z4 477 aaKnown RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CSNK1G3Q9Y6M4 447 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 J3QRE1 110 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 K7ESF4 209 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 SEC14L5O43304 696 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 COQ9O75208 318 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CFL1P23528 166 aaKnown RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CD38P28907 300 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 CASP3P42574 277 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 LSSP48449 732 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 PPP3R1P63098 170 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 SHC2P98077 582 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 OOSP2Q86WS3 158 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF761Q86XN6 746 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 LNX2Q8N448 690 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 HOXB13Q92826 284 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF559Q9BR84 538 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 DPH1Q9BZG8 443 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 RERGLQ9H628 205 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 TMEM27Q9HBJ8 222 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms