RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GIN1Q9NXP7 522 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 ICAM5Q9UMF0 924 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 TMED5Q9Y3A6 229 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 NPIPB9F8W1W9 429 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 HSPA4LO95757 839 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 HMGN2P05204 90 aaKnown RBP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ALOX5P09917 674 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 NEFHP12036 1026 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ADH6P28332 368 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 SERPINB4P48594 390 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 CCT5P48643 541 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 KLHL26Q53HC5 615 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 CFAP157Q5JU67 520 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 NCMAPQ5T1S8 102 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 NUFIP2Q7Z417 695 aaKnown RBP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 WFDC8Q8IUA0 241 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 COX18Q8N8Q8 333 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ABHD3Q8WU67 409 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ROBO4Q8WZ75 1007 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 AKAP1Q92667 903 aaKnown RBP eCLIP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 OSTF1Q92882 214 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 CDS1Q92903 461 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 S100PBPQ96BU1 408 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 GATA5Q9BWX5 397 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 BTBD2Q9BX70 525 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 IQCGQ9H095 443 aaKnown RBP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 PIGUQ9H490 435 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 CXorf56Q9H5V9 222 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 C12orf49Q9H741 205 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 GP6Q9HCN6 339 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 SH3BP4Q9P0V3 963 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 KLHL13Q9P2N7 655 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ATP6V1HQ9UI12 483 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ING1Q9UK53 422 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-228ENST00000476267 ACTL7BQ9Y614 415 aa11.67□□□□□ -0.54
MRPL55-228ENST00000476267 TMEM233B4DJY2 109 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 ETV2O00321 342 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 SCDO00767 359 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 SCAMP2O15127 329 aaKnown RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 FGF4P08620 206 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 LINC00032P0C843 101 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 BCKDHAP12694 445 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 EFNA1P20827 205 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 ME2P23368 584 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 CARD18P57730 90 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 POU6F2P78424 691 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 TNK1Q13470 666 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 RNPS1Q15287 305 aaKnown RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 TOMM34Q15785 309 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 PDSS1Q5T2R2 415 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 SFRP5Q5T4F7 317 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 CDC73Q6P1J9 531 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 DNM1P46Q6ZS02 220 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 SZRD1Q7Z422 152 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 ATG4DQ86TL0 474 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 STK32CQ86UX6 486 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 TUSC5Q8IXB3 177 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 STEAP2Q8NFT2 490 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 TRMOQ9BU70 441 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 FANCFQ9NPI8 374 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 ZCCHC3Q9NUD5 404 aaKnown RBP11.66□□□□□ -0.54
MRPL55-228ENST00000476267 GPATCH2Q9NW75 528 aa11.66□□□□□ -0.54
MRPL55-228ENST00000476267 CR1P17927 2039 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 ARID1AO14497 2285 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 ESPNB1AK53 854 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 ZNF814B7Z6K7 855 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 CHRNGP07510 517 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 SOD3P08294 240 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 HPGDP15428 266 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 PRKCAP17252 672 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 SFTPDP35247 375 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 ASMTP46597 345 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 P2RX1P51575 399 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 SUMO3P55854 103 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-228ENST00000476267 ATP5J2P56134 94 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 RPS4XP62701 263 aaKnown RBP11.65□□□□□ -0.54
MRPL55-228ENST00000476267 LASP1Q14847 261 aaKnown RBP11.65□□□□□ -0.54
MRPL55-228ENST00000476267 TAB1Q15750 504 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 XKR7Q5GH72 579 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 SLC25A53Q5H9E4 307 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 GTF2IRD2BQ6EKJ0 949 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 LRIG3Q6UXM1 1119 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 DNAJC14Q6Y2X3 702 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-228ENST00000476267 GTF2IRD2Q86UP8 949 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 CEP112Q8N8E3 955 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 FBXO27Q8NI29 283 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 GPR119Q8TDV5 335 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 EPS8L3Q8TE67 593 aaKnown RBP11.65□□□□□ -0.54
MRPL55-228ENST00000476267 TWIST2Q8WVJ9 160 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 RHOXF2Q9BQY4 288 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 HDHD5Q9BXW7 423 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 CXorf36Q9H7Y0 433 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 ANKZF1Q9H8Y5 726 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms