RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 GPR52Q9Y2T5 361 aa16.89■□□□□ 0.29
SEC61A2-213ENST00000475268 RPL36Q9Y3U8 105 aaKnown RBP16.89■□□□□ 0.29
SEC61A2-213ENST00000475268 SEC16AO15027 2179 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 IGHV5-10-1A0A0J9YXX1 117 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 TCRBV16S1A1N1A0A5B0 115 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 YKT6O15498 198 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 GABARAPO95166 117 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 DDAH2O95865 285 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 PIPP12273 146 aaPredicted RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 IFI30P13284 250 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 MLLT10P55197 1068 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 LSM3P62310 102 aaKnown RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 EFNB1P98172 346 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ACY1Q03154 408 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ZNF91Q05481 1191 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 SYT14P1Q58G82 188 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 SLC30A6Q6NXT4 461 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ZNF620Q6ZNG0 422 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 SHISA6Q6ZSJ9 500 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 RNF113BQ8IZP6 322 aaKnown RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 OR4D9Q8NGE8 314 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 SLC46A1Q96NT5 459 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 SLC38A2Q96QD8 506 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 CDCA4Q9BXL8 241 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 MKKSQ9NPJ1 570 aaPredicted RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 IL20Q9NYY1 176 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 FLRT3Q9NZU0 649 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 CTSFQ9UBX1 484 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ZNF223Q9UK11 482 aaPredicted RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ADAMTS20P59510 1910 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ADAMTS9Q9P2N4 1935 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 DMDP11532 3685 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 A0A1B0GWA3 101 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 CNOT3O75175 753 aaKnown RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 CH25HO95992 272 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 BCL10O95999 233 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ANKRD34CP0C6C1 535 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 DBTP11182 482 aaKnown RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 CD36P16671 472 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 PPICP45877 212 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 IRF3Q14653 427 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 NDUFAF6Q330K2 333 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 PEAR1Q5VY43 1037 aaPredicted RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 PRR23CQ6ZRP0 262 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ZNF721Q8TF20 911 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ZC3H10Q96K80 434 aaKnown RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 VN1R1Q9GZP7 353 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 NXF5Q9H1B4 397 aaKnown RBP16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 ATP13A2Q9NQ11 1180 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 SRPK3Q9UPE1 567 aa16.88■□□□□ 0.29
SEC61A2-213ENST00000475268 TECTAO75443 2155 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 VPS13AQ96RL7 3174 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 A0A0B4J2E0 115 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 A0A1B0GX12 115 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 SERINC4A6NH21 518 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 M0R082 166 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 POLR1CO15160 346 aaPredicted RBP16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CSTAP01040 98 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 IGKV3-11P04433 115 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 FUT1P19526 365 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 MAKP20794 623 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 LIPAP38571 399 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 SLC25A30Q5SVS4 291 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 MEDAGQ5VYS4 303 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 ZNF550Q7Z398 422 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 MRGPREQ86SM8 312 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CADM2Q8N3J6 435 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 OR4Q3Q8NH05 313 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 WDR36Q8NI36 951 aaKnown RBP16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 NAT6Q93015 286 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CCDC74BQ96LY2 380 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 ZNF582Q96NG8 517 aaPredicted RBP16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 GAL3ST4Q96RP7 486 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 TRIM2Q9C040 744 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 MED31Q9Y3C7 131 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CDH10Q9Y6N8 788 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 ZDBF2Q9HCK1 2354 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 SYNDIG1LA6NDD5 238 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 UNC119BA6NIH7 251 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CHP2O43745 196 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 HSMCR30P0CW71 290 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 TGFBR2P37173 567 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 FOXL2P58012 376 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 ZSWIM7Q19AV6 140 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 TRIM61Q5EBN2 209 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 RHBDD2Q6NTF9 364 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 TMEM105Q8N8V8 129 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 C9orf43Q8TAL5 461 aaPredicted RBP16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 TMEM163Q8TC26 289 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CRELD1Q96HD1 420 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 SAMD8Q96LT4 415 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 NUDT9Q9BW91 350 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 TEX12Q9BXU0 123 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 PRRG3Q9BZD7 231 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 CFL2Q9Y281 166 aa16.87■□□□□ 0.29
SEC61A2-213ENST00000475268 FOXD2O60548 495 aaPredicted RBP16.86■□□□□ 0.29
SEC61A2-213ENST00000475268 TIAF1O95411 115 aa16.86■□□□□ 0.29
SEC61A2-213ENST00000475268 PRKCDQ05655 676 aa16.86■□□□□ 0.29
SEC61A2-213ENST00000475268 MED22Q15528 200 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms