RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PABPC4LP0CB38 370 aaKnown RBP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 ACP2P11117 423 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 PSMA4P25789 261 aaKnown RBP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 SHC1P29353 583 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 PRIM2P49643 509 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 PRKAA2P54646 552 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 CARD18P57730 90 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 BSPH1Q075Z2 132 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 FOXF1Q12946 379 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 STK11Q15831 433 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 ZNF239Q16600 458 aaKnown RBP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 SFRP5Q5T4F7 317 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 NOXRED1Q6NXP6 359 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 IKBIPQ70UQ0 350 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 ZAR1Q86SH2 424 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 TDRPQ86YL5 185 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 GABRG1Q8N1C3 465 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 CDRT4Q8N9R6 151 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 NUP43Q8NFH3 380 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 OR2W6PQ8NHA6 318 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 POC1BQ8TC44 478 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 JADE3Q92613 823 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 CHMP6Q96FZ7 201 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 EGLN2Q96KS0 407 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 KLHDC3Q9BQ90 382 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 HDHD5Q9BXW7 423 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 SRXN1Q9BYN0 137 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 GSTO2Q9H4Y5 243 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 HHATLQ9HCP6 504 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 PSMC3IPQ9P2W1 217 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-209ENST00000474647 MALRD1Q5VYJ5 2156 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 SERTM1A2A2V5 107 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 RSL1D1O76021 490 aaKnown RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 GSTA1P08263 222 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 IFFO1Q0D2I5 559 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 CASP8Q14790 479 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 RNPS1Q15287 305 aaKnown RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 CHRFAM7AQ494W8 412 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 CCNJQ5T5M9 372 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 LRIG3Q6UXM1 1119 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 TRABD2AQ86V40 505 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 HIPK1Q86Z02 1210 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 CNPY4Q8N129 248 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 RIBC1Q8N443 379 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 COX18Q8N8Q8 333 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 ATP6V1C2Q8NEY4 427 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 B4GALNT2Q8NHY0 566 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 ZFP28Q8NHY6 868 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 ACTRT2Q8TDY3 377 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 EPS8L3Q8TE67 593 aaKnown RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 HSD17B8Q92506 261 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 ZIM3Q96PE6 472 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 MS4A4EQ96PG1 132 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 TMEM109Q9BVC6 243 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 ROPN1BQ9BZX4 212 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 ROPN1Q9HAT0 212 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-209ENST00000474647 TIGARQ9NQ88 270 aa12.44□□□□□ -0.42
CCDC78-209ENST00000474647 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 IGHV3-15A0A0B4J1V0 119 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 A8MV72 311 aaPredicted RBP12.43□□□□□ -0.42
CCDC78-209ENST00000474647 AKAP10O43572 662 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 SSX4O60224 188 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 SEC22BO75396 215 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 KCNK2O95069 426 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 FESP07332 822 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 NGFRP08138 427 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 PTNP21246 168 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 ADH6P28332 368 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 CDH11P55287 796 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 CD226Q15762 336 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 DUSP5Q16690 384 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 PGGHGQ32M88 737 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 FCRLAQ7L513 359 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 BHLHA15Q7RTS1 189 aaPredicted RBP12.43□□□□□ -0.42
CCDC78-209ENST00000474647 MISPQ8IVT2 679 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 SLC16A11Q8NCK7 471 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 OR6Y1Q8NGX8 325 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 CEP70Q8NHQ1 597 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 FAM76AQ8TAV0 307 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 PHOSPHO1Q8TCT1 267 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 PPCDCQ96CD2 204 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 GIMAP5Q96F15 307 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 LRTM1Q9HBL6 345 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 UBQLN4Q9NRR5 601 aa12.43□□□□□ -0.42
CCDC78-209ENST00000474647 WBP11Q9Y2W2 641 aaKnown RBP12.43□□□□□ -0.42
CCDC78-209ENST00000474647 GJE1A6NN92 205 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 RAMP1O60894 148 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 LYZL6O75951 148 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 IFI6P09912 130 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 ALOX5P09917 674 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 LINGO3P0C6S8 592 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms