RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 LAT2Q9GZY6 243 aa17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 SPAG4Q9NPE6 437 aa17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 EXOSC3Q9NQT5 275 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 DKKL1Q9UK85 242 aa17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 ICAM5Q9UMF0 924 aa17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 CARD8Q9Y2G2 431 aa17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF462Q96JM2 2506 aa17.26■□□□□ 0.35
CTDSP1-207ENST00000473420 A0A087WZY1 265 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 TRGV5A0A0B4J1U4 118 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 ANKUB1A6NFN9 424 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 NME4O00746 187 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 CDC40O60508 579 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■■■□ 22.3
CTDSP1-207ENST00000473420 DNAJA2O60884 412 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 TRAPPC6AO75865 159 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 PDE9AO76083 593 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 PABPC4LP0CB38 370 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 DPP4P27487 766 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 PCBP3P57721 371 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 EEFSECP57772 596 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 SKP2Q13309 424 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 LARS2Q15031 903 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 TOMM20Q15388 145 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 GLYR1Q49A26 553 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 ARHGAP11AQ6P4F7 1023 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 C16orf89Q6UX73 402 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 GFRALQ6UXV0 394 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 PGAM4Q8N0Y7 254 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 OR2T12Q8NG77 320 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 NEIL3Q8TAT5 605 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 ARSGQ96EG1 525 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 SH3YL1Q96HL8 342 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 ARMC7Q9H6L4 198 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 LDAHQ9H6V9 325 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF232Q9UNY5 417 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF443Q9Y2A4 671 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 LIPGQ9Y5X9 500 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 HEATR5AQ86XA9 2040 aa17.25■□□□□ 0.35
CTDSP1-207ENST00000473420 SVILO95425 2214 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF407Q9C0G0 2248 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 PRORSD1PA6NEY8 169 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 AQP7O14520 342 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 SERPINB7O75635 380 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 WISP2O76076 250 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 EEF1A1P68104 462 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 MXRA7P84157 204 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 RBPJQ06330 500 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF311Q5JNZ3 666 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 MRPL2Q5T653 305 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 CBLN3Q6UW01 205 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF836Q6ZNA1 936 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 CCDC80Q76M96 950 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 HMGN2P46Q86SG4 172 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 PATL1Q86TB9 770 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 VRK2Q86Y07 508 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 GRAMD2AQ8IUY3 354 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 BHLHE22Q8NFJ8 381 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 OR14L1PQ8NHC6 308 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 ALG2Q9H553 416 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 PIF1Q9H611 641 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 TAS2R10Q9NYW0 307 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 TMEM181Q9P2C4 612 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 PRDM4Q9UKN5 801 aa17.24■□□□□ 0.35
CTDSP1-207ENST00000473420 ZGRF1Q86YA3 2104 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 CDHR4A6H8M9 788 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 OR14I1A6ND48 311 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 CCT8L1PA6NM43 557 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 FAM47E-STBD1D6RA91 191 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 OIP5O43482 229 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 ZIC3O60481 467 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 UBTFL6P0CB48 400 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 T-ENOLP0DO92 83 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 HK1P19367 917 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 PRKAR1BP31321 381 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 GCKP35557 465 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 RNF144AP50876 292 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF41P51814 821 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 PLAURQ03405 335 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 LIPEQ05469 1076 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 CBFBQ13951 182 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 ELOAQ14241 798 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 IGFBP7Q16270 282 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 NDUFAF6Q330K2 333 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 EIPR1Q53HC9 387 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 NHSL2Q5HYW2 709 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 WIPI1Q5MNZ9 446 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 DHRS4L2Q6PKH6 230 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 IFNEQ86WN2 208 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 CHERPQ8IWX8 916 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 ZNF440Q8IYI8 595 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 MICU2Q8IYU8 434 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 TMCO5AQ8N6Q1 288 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 OR5W2Q8NH69 310 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 SLC35B4Q969S0 331 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 SLC6A15Q9H2J7 730 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 EXO5Q9H790 373 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 DNAJB12Q9NXW2 375 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 DNAJC13O75165 2243 aa17.23■□□□□ 0.35
CTDSP1-207ENST00000473420 A0A1B0GTH9 108 aa17.22■□□□□ 0.35
CTDSP1-207ENST00000473420 ELOVL7A1L3X0 281 aa17.22■□□□□ 0.35
CTDSP1-207ENST00000473420 C7orf72A4D263 438 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms