RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ARHGDIAP52565 204 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 RAB40BQ12829 278 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 IL18R1Q13478 541 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 CUL1Q13616 776 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 C6orf226Q5I0X4 101 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 ANXA8L1Q5VT79 327 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 LIPNQ5VXI9 398 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 PVRIGQ6DKI7 326 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 FAHD2BQ6P2I3 314 aaPredicted RBP5.4□□□□□ -1.54
SMC5-202ENST00000471372 RFWD3Q6PCD5 774 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 REG3GQ6UW15 175 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 FGFRL1Q8N441 504 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 OR6C4Q8NGE1 309 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 FLVCR1-AS1Q8TAF5 88 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 FAHD2AQ96GK7 314 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 CITED1Q99966 193 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 TUBGCP2Q9BSJ2 902 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 VCPKMTQ9H867 229 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 ABCC13Q9NSE7 274 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 AK6Q9Y3D8 172 aaKnown RBP5.4□□□□□ -1.54
SMC5-202ENST00000471372 SAGE2PA6NJ88 616 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 IFITM10A6NMD0 228 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 H0YC42 278 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 HPP00738 406 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 ETS2P15036 469 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 PVRP15151 417 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 IMPDH1P20839 514 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 UGT1A5P35504 534 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 GSK3BP49841 420 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 HLCSP50747 726 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 LIM2P55344 173 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 RIPPLY1Q0D2K3 151 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 ZNF154Q13106 437 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 DPYSL3Q14195 570 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 DCST2Q5T1A1 773 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 ZNF57Q68EA5 555 aaPredicted RBP5.39□□□□□ -1.55
SMC5-202ENST00000471372 CCDC73Q6ZRK6 1079 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 PHC2Q8IXK0 858 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 DHRSXQ8N5I4 330 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 ZNF614Q8N883 585 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 Q8NBF4 154 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 CCDC148Q8NFR7 591 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 KCNG3Q8TAE7 436 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 FBXO17Q96EF6 278 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 SPATA16Q9BXB7 569 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 NUDT4Q9NZJ9 180 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 NPTNQ9Y639 398 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 ATP10AO60312 1499 aa5.39□□□□□ -1.55
SMC5-202ENST00000471372 NCF1BA6NI72 391 aaPredicted RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 ACOD1A6NK06 481 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 FOXI3A8MTJ6 420 aaPredicted RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 NCF1CA8MVU1 366 aaPredicted RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 RS1O15537 224 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 IDH3BO43837 385 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 WBP4O75554 376 aaKnown RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 DIRAS1O95057 198 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 CFC1BP0CG36 223 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 CFC1P0CG37 223 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 CDH5P33151 784 aaPredicted RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 RDXP35241 583 aaKnown RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 DUSP3P51452 185 aaPredicted RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 HSPA2P54652 639 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 RPS8P62241 208 aaKnown RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 HNRNPA0Q13151 305 aaKnown RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 NDUFA9Q16795 377 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 C17orf58Q2M2W7 97 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 BEND3Q5T5X7 828 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 LGSNQ5TDP6 509 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 CARD17Q5XLA6 110 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 LRRC66Q68CR7 880 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 PAQR6Q6TCH4 344 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 RNF130Q86XS8 419 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 EGFL6Q8IUX8 553 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 KIR3DL3Q8N743 410 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 C15orf54Q8N8G6 183 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 OR4D9Q8NGE8 314 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 OR9A4Q8NGU2 314 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 FAM110BQ8TC76 370 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 TIMD4Q96H15 378 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 ART5Q96L15 291 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 TRIM62Q9BVG3 475 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 FAM120CQ9NX05 1096 aaKnown RBP5.38□□□□□ -1.55
SMC5-202ENST00000471372 KIAA1257Q9ULG3 409 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 SCML2Q9UQR0 700 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 RNF24Q9Y225 148 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 USP16Q9Y5T5 823 aa5.38□□□□□ -1.55
SMC5-202ENST00000471372 IGHV3OR16-12A0A075B7B8 117 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 RPL37AP8A6NKH3 93 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.37□□□□□ -1.55
SMC5-202ENST00000471372 H0YIV9 168 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 RNF13O43567 381 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 PRKAB2O43741 272 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 UMPSP11172 480 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 IGFBP5P24593 272 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 CAPGP40121 348 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 RPL13AP40429 203 aaKnown RBP5.37□□□□□ -1.55
SMC5-202ENST00000471372 ACY1Q03154 408 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 LY6DQ14210 128 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 CYP51A1Q16850 503 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms