RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 NSDHLQ15738 373 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ADGRF1Q5T601 910 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 DESI1Q6ICB0 168 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SLC30A7Q8NEW0 376 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ANGPTL6Q8NI99 470 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CDKN2AIPNLQ96HQ2 116 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 GPR20Q99678 358 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NKX3-1Q99801 234 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 KATNB1Q9BVA0 655 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ARV1Q9H2C2 271 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF331Q9NQX6 463 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 VDAC3Q9Y277 283 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 OR1A2Q9Y585 309 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 IQSEC2Q5JU85 1478 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SETD1BQ9UPS6 1966 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 J3KR12 359 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NFKBIEO00221 500 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ADAMTS4O75173 837 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NSA2O95478 260 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CAPNS1P04632 268 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 THBS1P07996 1170 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SYPP08247 313 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 UBBP0CG47 229 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 UBCP0CG48 685 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 UBE2G1P62253 170 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 RPS27AP62979 156 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 UBA52P62987 128 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 RAC1P63000 192 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 PDE7AQ13946 482 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 EBPQ15125 230 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SLC22A6Q4U2R8 563 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 FAM182AQ5T1J6 154 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF440Q8IYI8 595 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 KDM1BQ8NB78 822 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NANPQ8TBE9 248 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 TSACCQ96A04 125 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 TVP23CQ96ET8 276 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 PINK1Q9BXM7 581 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SRRQ9GZT4 340 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CHRDQ9H2X0 955 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NKX1-2Q9UD57 310 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 MCTS1Q9ULC4 181 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ACTL7AQ9Y615 435 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 DISP2A7MBM2 1401 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 KIF20BQ96Q89 1820 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 WNK3Q9BYP7 1800 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PQ09 198 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 DENRO43583 198 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 DUSP11O75319 330 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SULT1C4O75897 302 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NME2P22392 152 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CPT2P23786 658 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NPY1RP25929 384 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 AMTP48728 403 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 EXOSC2Q13868 293 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SMAD2Q15796 467 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 HACD4Q5VWC8 232 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CPXM2Q8N436 756 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 LRRC18Q8N456 261 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 OR5L1Q8NGL2 311 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 OR56B4Q8NH76 319 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 DPH2Q9BQC3 489 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 KCNMB3Q9NPA1 279 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 IGSF9Q9P2J2 1179 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 JCADQ9P266 1359 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ALS2Q96Q42 1657 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ADAM10O14672 748 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 YIF1AO95070 293 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 EPOP01588 193 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TYRP14679 529 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 USF1P22415 310 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 PSMB10P40306 273 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CSN1S1P47710 185 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 AGTR2P50052 363 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 DAP3P51398 398 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 GK3PQ14409 553 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 UGT3A2Q3SY77 523 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 FAM74A1Q5RGS3 127 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 LPCAT3Q6P1A2 487 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 GRASPQ7Z6J2 395 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 OR52H1Q8NGJ2 320 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 OR5W2Q8NH69 310 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TLR9Q9NR96 1032 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 LGALS13Q9UHV8 139 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TULP4Q9NRJ4 1543 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SPATA31A1Q5TZJ5 1347 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 HTRA2O43464 458 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SUSD5O60279 629 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CST3P01034 146 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF17P17021 662 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF30P17039 623 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 MMP8P22894 467 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NFYAP23511 347 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SSTR4P31391 388 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SHC2P98077 582 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CATR1Q13166 79 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SPHARQ15513 63 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 UBE2NLQ5JXB2 153 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms