RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 OR4K17Q8NGC6 315 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 NFKBIDQ8NI38 313 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 OR2B2Q9GZK3 357 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 NDE1Q9NXR1 346 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 PLEKHB1Q9UF11 243 aaPredicted RBP13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 FBXL2Q9UKC9 423 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 ANGPT4Q9Y264 503 aa13.59□□□□□ -0.23
CDC42SE1-203ENST00000470278 ZGRF1Q86YA3 2104 aa13.58□□□□□ -0.23
CDC42SE1-203ENST00000470278 A0A1B0GVC2 190 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 NPIPA5E9PKD4 350 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF264O43296 627 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 SUSD5O60279 629 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 EIF4E2O60573 245 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 HCN1O60741 890 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 DNAJA2O60884 412 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 CBX6O95503 412 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 CALB2P22676 271 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 PGM1P36871 562 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 CPA2P48052 419 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC7A2P52569 658 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 DSCR4P56555 118 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF117Q03924 483 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 SKP2Q13309 424 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 VEZF1Q14119 521 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 VMACQ2NL98 169 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 OR5M10Q6IEU7 315 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 EIF3MQ7L2H7 374 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ATCAYQ86WG3 371 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 KRT73Q86Y46 540 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC15A3Q8IY34 581 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 PGAM4Q8N0Y7 254 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 GHDCQ8N2G8 530 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF614Q8N883 585 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 GATSQ8NAP1 163 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 PHOSPHO1Q8TCT1 267 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 WDR60Q8WVS4 1066 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF583Q96ND8 569 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 TSPAN10Q9H1Z9 355 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 PTGES2Q9H7Z7 377 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 EXOSC3Q9NQT5 275 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 CMTM6Q9NX76 183 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 SEC14L3Q9UDX4 400 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 ICAM5Q9UMF0 924 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 NPIPA1Q9UND3 350 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 IFT52Q9Y366 437 aa13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE1-203ENST00000470278 NME4O00746 187 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 HCRTR2O43614 444 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 CSTAP01040 98 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 CELA3AP09093 270 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 PABPC4LP0CB38 370 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 ESRRAP11474 423 aaPredicted RBP13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 IL7RP16871 459 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 P2RX1P51575 399 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 PSME3P61289 254 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 KCNJ10P78508 379 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 PLAURQ03405 335 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 MRPL49Q13405 166 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC10A1Q14973 349 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 INTS11Q5TA45 600 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 ARHGAP11AQ6P4F7 1023 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 TRILQ7L0X0 811 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 OR52P1PQ8NH57 321 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 B4GALNT2Q8NHY0 566 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 ARSGQ96EG1 525 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 C1GALT1C1Q96EU7 318 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 NSL1Q96IY1 281 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF607Q96SK3 696 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 SPATA5L1Q9BVQ7 753 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 CACYBPQ9HB71 228 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 MED11Q9P086 117 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 TMEM181Q9P2C4 612 aa13.57□□□□□ -0.24
CDC42SE1-203ENST00000470278 DCHS2Q6V1P9 2916 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 A0A087WZY1 265 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 C7orf72A4D263 438 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 OR14I1A6ND48 311 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 ANKUB1A6NFN9 424 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 AQP7O14520 342 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 PDE9AO76083 593 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 T-ENOLP0DO92 83 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 DPP4P27487 766 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 EEF1A1P68104 462 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 LARS2Q15031 903 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 GLYR1Q49A26 553 aaPredicted RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 C4orf17Q53FE4 359 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 NHSL2Q5HYW2 709 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms