RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 MTERF4Q7Z6M4 381 aaKnown RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 NATD1Q8N6N6 113 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 BANPQ8N9N5 519 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 POC1BQ8TC44 478 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 OTUB1Q96FW1 271 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 CHMP6Q96FZ7 201 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 COX4I2Q96KJ9 171 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 KLHL15Q96M94 604 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 OR10A4Q9H209 315 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 TMEM185BQ9H7F4 350 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-208ENST00000470076 KLF4O43474 513 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 TUBBP07437 444 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 ATP6V1C1P21283 382 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 ELK4P28324 431 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 ALDH3A1P30838 453 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 NR1H2P55055 460 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 CARD18P57730 90 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 XKR7Q5GH72 579 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 CDC73Q6P1J9 531 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 PLEKHM3Q6ZWE6 761 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 LILRA2Q8N149 483 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 RIBC1Q8N443 379 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-208ENST00000470076 ZNF527Q8NB42 609 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 OR7A2PQ8NGA2 310 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 PSMA8Q8TAA3 256 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 PPP1R14CQ8TAE6 165 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 OR5P2Q8WZ92 322 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 OSTF1Q92882 214 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 CDS1Q92903 461 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 Q96MF0 132 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 BDH2Q9BUT1 245 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 ACTRT3Q9BYD9 372 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 HOXD1Q9GZZ0 328 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 TIGARQ9NQ88 270 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 ATAD3AQ9NVI7 634 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 SNX8Q9Y5X2 465 aa15.63■□□□□ 0.09
COL7A1-208ENST00000470076 FN1P02751 2386 aaKnown RBP15.63■□□□□ 0.09
COL7A1-208ENST00000470076 PRR14LQ5THK1 2151 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 TLDC2A0PJX2 215 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 H3BNH8 94 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 PEX11AO75192 247 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 LYPLA1O75608 230 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-208ENST00000470076 KRT16P08779 473 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 LAMP1P11279 417 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 PSMB1P20618 241 aaKnown RBP15.62■□□□□ 0.09
COL7A1-208ENST00000470076 ADH6P28332 368 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 AGTR1P30556 359 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 SERPINB5P36952 375 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 CCT3P49368 545 aaKnown RBP15.62■□□□□ 0.09
COL7A1-208ENST00000470076 ZNF117Q03924 483 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 ATP6AP1LQ52LC2 224 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 YTHDF3Q7Z739 585 aaKnown RBP15.62■□□□□ 0.09
COL7A1-208ENST00000470076 OR56A1Q8NGH5 318 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 PHOSPHO1Q8TCT1 267 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 ADAMTS15Q8TE58 950 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 PERPQ96FX8 193 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 REXO5Q96IC2 774 aaKnown RBP15.62■□□□□ 0.09
COL7A1-208ENST00000470076 KLHDC3Q9BQ90 382 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 GSX2Q9BZM3 304 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 FAF1Q9UNN5 650 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-208ENST00000470076 GPR52Q9Y2T5 361 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 ACTL7BQ9Y614 415 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 JMJD1CQ15652 2540 aa15.62■□□□□ 0.09
COL7A1-208ENST00000470076 GJE1A6NN92 205 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 H7C1Q1 480 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 NUDT14O95848 222 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 SFTPDP35247 375 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 P2RX1P51575 399 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 SUMO3P55854 103 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 FOXF1Q12946 379 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 TP53BP2Q13625 1128 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 PTGR1Q14914 329 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 RNPS1Q15287 305 aaKnown RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 ZNF239Q16600 458 aaKnown RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 LSM12Q3MHD2 195 aaKnown RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 KLHL26Q53HC5 615 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 C6orf136Q5SQH8 315 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 ZNF704Q6ZNC4 412 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 AGR3Q8TD06 166 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 RNF128Q8TEB7 428 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 CPNE4Q96A23 557 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 ARSGQ96EG1 525 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 PRPF18Q99633 342 aaKnown RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 MECRQ9BV79 373 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 ACTR6Q9GZN1 396 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 GIMAP2Q9UG22 337 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 ICAM5Q9UMF0 924 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 GPC6Q9Y625 555 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-208ENST00000470076 CSPG4Q6UVK1 2322 aa15.61■□□□□ 0.09
COL7A1-208ENST00000470076 USF3Q68DE3 2245 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 TMCC2O75069 709 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 LY6G6DO95868 133 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 NID1P14543 1247 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 SPDYE7PQ495Y7 208 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 TMEM201Q5SNT2 666 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 DCST2Q5T1A1 773 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 CBLN3Q6UW01 205 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 WFDC8Q8IUA0 241 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 STEAP2Q8NFT2 490 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms