RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C3orf30Q96M34 536 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 Q96MF0 132 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 GLRX2Q9NS18 164 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 CARD8Q9Y2G2 431 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 FREM3P0C091 2139 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 NPIPA5A0A0B4J1W7 369 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-210ENST00000469897 NPIPA7E9PJI5 369 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 H7C1Q1 480 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF195O14628 629 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
CPSF4-210ENST00000469897 NUDT14O95848 222 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 C6orf47O95873 294 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 NPIPA8P0DM63 369 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 PPP3CBP16298 524 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ARRB2P32121 409 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 SFTPDP35247 375 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 HPCAL1P37235 193 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF117Q03924 483 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 PTGR1Q14914 329 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 TOMM34Q15785 309 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-210ENST00000469897 SPDYE7PQ495Y7 208 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 BEX5Q5H9J7 111 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 C6orf136Q5SQH8 315 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 BEND4Q6ZU67 534 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 PLEKHM3Q6ZWE6 761 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 KRTCAP2Q8N6L1 136 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ATP6V1C2Q8NEY4 427 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 FBXO27Q8NI29 283 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 TCP10LQ8TDR4 215 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 CAVIN3Q969G5 261 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 KLHL15Q96M94 604 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 STACQ99469 402 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 C1orf50Q9BV19 199 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ACTRT3Q9BYD9 372 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 DUSP22Q9NRW4 184 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 ZDHHC2Q9UIJ5 367 aa11.86□□□□□ -0.51
CPSF4-210ENST00000469897 FAF1Q9UNN5 650 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-210ENST00000469897 NIPBLQ6KC79 2804 aaeCLIP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 HSPA4LO95757 839 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 DDX5P17844 614 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 MAPK1P28482 360 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 RPL3P39023 403 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 EIF1P41567 113 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 FOXF1Q12946 379 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 TP53BP2Q13625 1128 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 TSC22D1Q15714 1073 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 TMEM176BQ3YBM2 270 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ATP6AP1LQ52LC2 224 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF704Q6ZNC4 412 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 NUFIP2Q7Z417 695 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 MTERF4Q7Z6M4 381 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 STK32CQ86UX6 486 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF524Q96C55 264 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 COQ8BQ96D53 544 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ARSGQ96EG1 525 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 PLPPR2Q96GM1 343 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 REXO5Q96IC2 774 aaKnown RBP11.85□□□□□ -0.51
CPSF4-210ENST00000469897 BDH2Q9BUT1 245 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ACTR6Q9GZN1 396 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 HOXD1Q9GZZ0 328 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ANKZF1Q9H8Y5 726 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 FANCFQ9NPI8 374 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 GPATCH2Q9NW75 528 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 GPR52Q9Y2T5 361 aa11.85□□□□□ -0.51
CPSF4-210ENST00000469897 H3BNH8 94 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 CFLARO15519 480 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 SKAP2O75563 359 aaPredicted RBP11.84□□□□□ -0.51
CPSF4-210ENST00000469897 HEXAP06865 529 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 TUBBP07437 444 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 PABPC4LP0CB38 370 aaKnown RBP11.84□□□□□ -0.51
CPSF4-210ENST00000469897 CREB1P16220 341 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 AGTR1P30556 359 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 P2RX1P51575 399 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 ATP12AP54707 1039 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 NDUFAF6Q330K2 333 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 LSM12Q3MHD2 195 aaKnown RBP11.84□□□□□ -0.51
CPSF4-210ENST00000469897 XKR7Q5GH72 579 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 TMEM201Q5SNT2 666 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 DCST2Q5T1A1 773 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 CLEC4FQ8N1N0 589 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 FNDC5Q8NAU1 212 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF527Q8NB42 609 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms