RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RPP38P78345 283 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 OLR1P78380 273 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SRSF6Q13247 344 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 RAPSNQ13702 412 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 LY6DQ14210 128 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SRSF7Q16629 238 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 MEP1AQ16819 746 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SFT2D3Q587I9 215 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 MTX3Q5HYI7 312 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ATP1A1-AS1Q5TC04 95 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 MORN5Q5VZ52 161 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 OR52E8Q6IFG1 317 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 LCN10Q6JVE6 187 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 PAPD4Q6PIY7 484 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 IQCKQ8N0W5 287 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ZCCHC7Q8N3Z6 543 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 AMER3Q8N944 861 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SCAIQ8N9R8 606 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 NAXEQ8NCW5 288 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SETD9Q8NE22 299 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 PLPP5Q8NEB5 264 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 OR11G2Q8NGC1 345 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 OR5L2Q8NGL0 311 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 OR14A16Q8NHC5 309 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 CDC26Q8NHZ8 85 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 M1APQ8TC57 530 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 TCP10LQ8TDR4 215 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 CREB3L4Q8TEY5 395 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF473Q8WTR7 871 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 COQ8BQ96D53 544 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM237Q96Q45 408 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 MS4A8Q9BY19 250 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SPAG4Q9NPE6 437 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ADAP2Q9NPF8 381 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 MIEF1Q9NQG6 463 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF71Q9NQZ8 489 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 AGPAT4Q9NRZ5 378 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 CFL2Q9Y281 166 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 TP53TG5Q9Y2B4 290 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 RNF11Q9Y3C5 154 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 FIS1Q9Y3D6 152 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 HEATR5BQ9P2D3 2071 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 IGHV1-45A0A0A0MS14 117 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 TRAV17A0A0B4J275 112 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 C1orf226A1L170 272 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 DPPA5A6NC42 116 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SAGE2PA6NJ88 616 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 FOXO6A8MYZ6 492 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 RHODO00212 210 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 MANBAO00462 879 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SOCS6O14544 535 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 OR7A17O14581 309 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 BIRC5O15392 142 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 PCDH7O60245 1069 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 CTNSO60931 367 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SEC22BO75396 215 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 PDYNP01213 254 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 KLK1P06870 262 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 UMODP07911 640 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 GCAP28676 217 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 KRT20P35900 424 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 PGM1P36871 562 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ASMTP46597 345 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 TMED10P49755 219 aaKnown RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 LIM2P55344 173 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 TNFRSF17Q02223 184 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 OC90Q02509 493 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SLC18A2Q05940 514 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 CHAF1BQ13112 559 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SYT16Q17RD7 645 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ADPRMQ3LIE5 342 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ATP6AP1LQ52LC2 224 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 C10orf25Q5T742 122 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF793Q6ZN11 406 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 COX15Q7KZN9 410 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 R3HCC1LQ7Z5L2 792 aaKnown RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ANKRD37Q7Z713 158 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 C10orf107Q8IVU9 208 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 CA13Q8N1Q1 262 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM156Q8N614 296 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 BANPQ8N9N5 519 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM178AQ8NBL3 297 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 OR4K14Q8NGD5 310 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 OR52B6Q8NGF0 335 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 OR5T3Q8NGG3 340 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 FAM76AQ8TAV0 307 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SLC22A8Q8TCC7 542 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 EME1Q96AY2 570 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 C8orf44Q96CB5 159 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 MOCOSQ96EN8 888 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 VMP1Q96GC9 406 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 METTL2AQ96IZ6 378 aaKnown RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 PPP3R2Q96LZ3 170 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ZIM3Q96PE6 472 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 BBS4Q96RK4 519 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 UTP23Q9BRU9 249 aaKnown RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 FUZQ9BT04 418 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SPNS1Q9H2V7 528 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 KLHL31Q9H511 634 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 AKIRIN1Q9H9L7 192 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms