RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 DEFB109BQ30KR1 87 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 FLYWCH1Q4VC44 716 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 INTS11Q5TA45 600 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 H3F3CQ6NXT2 135 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 IDO2Q6ZQW0 420 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 DCDC5Q6ZRR9 648 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 DHFR2Q86XF0 187 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 PROSER1Q86XN7 944 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SLC30A8Q8IWU4 369 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SLC34A3Q8N130 599 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 METTL25Q8N6Q8 603 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 FAM162AQ96A26 154 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 G6PC3Q9BUM1 346 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ZBTB20Q9HC78 741 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CPNE5Q9HCH3 593 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CALML5Q9NZT1 146 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 A0A0G2JPF8 293 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 A6NL46 340 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 HNRNPCL2B2RXH8 293 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 HNRNPCL3B7ZW38 293 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 TAF4O00268 1085 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CASQ2O14958 399 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 KIAA0513O60268 411 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 TRMUO75648 421 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CIB2O75838 187 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 IL33O95760 270 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 HNRNPCL4P0DMR1 293 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF3P17036 446 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 IL12BP29460 328 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 KDELR2P33947 212 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SOX3P41225 446 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 PSMD4P55036 377 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 MLF1P58340 268 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 MRPS15P82914 257 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CRB2Q5IJ48 1285 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ACER2Q5QJU3 275 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 PRAMEF8Q5VWM4 474 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 PRAMEF7Q5VXH5 474 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 LCN8Q6JVE9 175 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 JMJD6Q6NYC1 403 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 DHRS4L2Q6PKH6 230 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 LRRC69Q6ZNQ3 347 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SATL1Q86VE3 508 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SPPL2CQ8IUH8 684 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF619Q8N2I2 560 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 BHLHE22Q8NFJ8 381 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 BBS10Q8TAM1 723 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SGK3Q96BR1 496 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 COL21A1Q96P44 957 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SAP130Q9H0E3 1048 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 MUC13Q9H3R2 512 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 GORASP2Q9H8Y8 452 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SP140LQ9H930 580 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 SIAEQ9HAT2 523 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 BCL2L10Q9HD36 194 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 MRTO4Q9UKD2 239 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 YARS2Q9Y2Z4 477 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 KCNMB2Q9Y691 235 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 TNRC6AQ8NDV7 1962 aaKnown RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ITPR1Q14643 2758 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 TSPAN2O60636 221 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 UGT2B11O75310 529 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PPM1BO75688 479 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 UGT2B17O75795 530 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ALX3O95076 343 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SERPINA1P01009 418 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SSR4P51571 173 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 CCL11P51671 97 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ARHGDIBP52566 201 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 FBXW4P57775 412 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SLC34A1Q06495 639 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 MEP1AQ16819 746 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 DTX3Q8N9I9 347 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR5M3Q8NGP4 307 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR10Q1Q8NGQ4 319 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR10Z1Q8NGY1 313 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR4C3Q8NH37 302 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 IPCEF1Q8WWN9 437 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 TAMM41Q96BW9 452 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 NSMCE2Q96MF7 247 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF607Q96SK3 696 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 RSPO3Q9BXY4 272 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ADNPQ9H2P0 1102 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 DENND2DQ9H6A0 471 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ANKRD10Q9NXR5 420 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 FLRT3Q9NZU0 649 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 KCNE5Q9UJ90 142 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 V9GYQ6 96 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR6C70A6NIJ9 312 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 CLDN24A6NM45 220 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 K7ENP7 123 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ABCB7O75027 752 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms