RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CHMP24386 653 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 ZNF136P52737 540 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 AQP5P55064 265 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 GFRA1P56159 465 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 TGIF2LYQ8IUE0 185 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 ZNF614Q8N883 585 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 PHOSPHO1Q8TCT1 267 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 XAGE5Q8WWM1 108 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 SH3YL1Q96HL8 342 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 ALPK1Q96QP1 1244 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 SDF2Q99470 211 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 EBF4Q9BQW3 602 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 GPATCH1Q9BRR8 931 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 SLC35A5Q9BS91 424 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 SERHL2Q9H4I8 314 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 TCF7L2Q9NQB0 619 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 JKAMPQ9P055 326 aa12.71□□□□□ -0.37
CCHCR1-211ENST00000467553 MPDZO75970 2070 aa12.71□□□□□ -0.38
CCHCR1-211ENST00000467553 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 H0Y3Z8 333 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 RCBTB2O95199 551 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 C1QCP02747 245 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 IL6P05231 212 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 NGFRP08138 427 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 CDKN2CP42773 168 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 PCYT1AP49585 367 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 POLR2JP52435 117 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 ATP12AP54707 1039 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 GANABQ14697 944 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 GPR68Q15743 365 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 SAXO2Q658L1 398 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 TNFAIP8L2Q6P589 184 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 C16orf62Q7Z3J2 963 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 CDC20BQ86Y33 519 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 MIER2Q8N344 545 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 TRIML2Q8N7C3 387 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF527Q8NB42 609 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 RAB8BQ92930 207 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 C1GALT1C1Q96EU7 318 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 THOC1Q96FV9 657 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 SFXN3Q9BWM7 321 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 SDR39U1Q9NRG7 319 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 CCM2LQ9NUG4 571 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 EXD2Q9NVH0 621 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 ZIM2Q9NZV7 527 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 VDAC3Q9Y277 283 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF337Q9Y3M9 751 aa12.7□□□□□ -0.38
CCHCR1-211ENST00000467553 ABCA4P78363 2273 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 IGLV3-32A0A0A0MS00 114 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 A0A1W2PQD3 144 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 SHISA8B8ZZ34 492 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 RFXANKO14593 260 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 ANP32DO95626 131 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 TMIGD3P0DMS9 266 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 PEPDP12955 493 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 FOSL1P15407 271 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 LHX2P50458 406 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 B3GALT5-AS1P59052 145 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 STX1BP61266 288 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 LRRC74AQ0VAA2 488 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 BCL2A1Q16548 175 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 ARHGAP11BQ3KRB8 267 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 ATAD3BQ5T9A4 648 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 ADGRE4PQ86SQ3 457 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 UBQLNLQ8IYU4 475 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 OR9I1Q8NGQ6 314 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 B4GALNT2Q8NHY0 566 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 WNT2BQ93097 391 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 NEURL3Q96EH8 262 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 DACH2Q96NX9 599 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 TUBA1CQ9BQE3 449 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 CCDC28BQ9BUN5 200 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 PIGMQ9H3S5 423 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 HHATLQ9HCP6 504 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 AKAP6Q13023 2319 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 KIAA1549Q9HCM3 1950 aa12.69□□□□□ -0.38
CCHCR1-211ENST00000467553 UQCRHLA0A096LP55 91 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 OR2M5A3KFT3 312 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 H3BML4 177 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 H3BNH8 94 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 HCRTR2O43614 444 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 FCMRO60667 390 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 STX11O75558 287 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 AGR2O95994 175 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 AK1P00568 194 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 CRHP06850 196 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 KHKP50053 298 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 CD226Q15762 336 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 GLYR1Q49A26 553 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 GPAT3Q53EU6 434 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms