RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 MGAT2Q10469 447 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 CSTF3Q12996 717 aaKnown RBP10.84□□□□□ -0.67
UBR4-210ENST00000466969 TCEAL1Q15170 157 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 C18orf21Q32NC0 220 aaPredicted RBP10.84□□□□□ -0.67
UBR4-210ENST00000466969 CT45A2Q5DJT8 189 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 MRM1Q6IN84 353 aaKnown RBP10.84□□□□□ -0.67
UBR4-210ENST00000466969 AADACL2Q6P093 401 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 MARCH3Q86UD3 253 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 TRABD2AQ86V40 505 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 LMNTD2Q8IXW0 634 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 C17orf78Q8N4C9 275 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 SLC35B2Q8TB61 432 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 CALML6Q8TD86 181 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 CKAP2Q8WWK9 683 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 UBE2E3Q969T4 207 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 ZNF416Q9BWM5 594 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 RTN4RQ9BZR6 473 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 SAYSD1Q9NPB0 183 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 SLC17A5Q9NRA2 495 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 TNFRSF19Q9NS68 423 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 ZNF639Q9UID6 485 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 FBXO5Q9UKT4 447 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
UBR4-210ENST00000466969 A0A1B0GTH6 734 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 AKR1B15C9JRZ8 316 aaPredicted RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 FOXE1O00358 373 aaPredicted RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 KLF11O14901 512 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 XPNPEP2O43895 674 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 TMPRSS11DO60235 418 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 SERPINB1P30740 379 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 CTNNA1P35221 906 aaKnown RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 CDKN2DP55273 166 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 PROK1P58294 105 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 CDKL1Q00532 357 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 TRMT12Q53H54 448 aaKnown RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 REP15Q6BDI9 236 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 MEPCEQ7L2J0 689 aaKnown RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 LRRC70Q7Z2Q7 622 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 RETREG3Q86VR2 466 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 WDFY1Q8IWB7 410 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 PHF21AQ96BD5 680 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 ANKRD27Q96NW4 1050 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 ZNF300Q96RE9 604 aaPredicted RBP10.83□□□□□ -0.68
UBR4-210ENST00000466969 NPAS1Q99742 590 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 KATNB1Q9BVA0 655 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 TBL1XR1Q9BZK7 514 aa10.83□□□□□ -0.68
UBR4-210ENST00000466969 A0A0A6YYD5 115 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 C7orf72A4D263 438 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 CCDC151A5D8V7 595 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 GJE1A6NN92 205 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 ZNF724A8MTY0 619 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 K7EIL1 84 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 PRAMEF4O60810 478 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 HPXP02790 462 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 PSMA4P25789 261 aaKnown RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 RWDD2BP57060 319 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 SLC25A3Q00325 362 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 IRF8Q02556 426 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 NRN1LQ496H8 165 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 PRAMEF9Q5VWM5 478 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 FRA10AC1Q70Z53 315 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 SLC44A2Q8IWA5 706 aaPredicted RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 CDK20Q8IZL9 346 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 NKAPQ8N5F7 415 aaKnown RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 OR4F15Q8NGB8 312 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 LINC01006Q8NI28 216 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 SLC9A6Q92581 669 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 APH1AQ96BI3 265 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 ZNF669Q96BR6 464 aaPredicted RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 IQCDQ96DY2 449 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 WDR34Q96EX3 536 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 TBX15Q96SF7 602 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 ZNF442Q9H7R0 627 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 ANO10Q9NW15 660 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 FAM120CQ9NX05 1096 aaKnown RBP10.82□□□□□ -0.68
UBR4-210ENST00000466969 PAK5Q9P286 719 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 AUP1Q9Y679 476 aa10.82□□□□□ -0.68
UBR4-210ENST00000466969 IGLV3-32A0A0A0MS00 114 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 IGHV1-18A0A0C4DH31 117 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 DEAF1O75398 565 aaPredicted RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 BCAS2O75934 225 aaPredicted RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 TTC4O95801 387 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 ANGPTL1O95841 491 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 ATP1B1P05026 303 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 IGFBP1P08833 259 aaPredicted RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 ETS1P14921 441 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 SHC1P29353 583 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 VPS41P49754 854 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 ARFIP1P53367 373 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 HADHBP55084 474 aaKnown RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 SARNPP82979 210 aaKnown RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 MVKQ03426 396 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 CHIT1Q13231 466 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 DMRTC1Q5HYR2 192 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms