RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SMC3Q9UQE7 1217 aa3.01□□□□□ -1.93
LRCH3-211ENST00000466054 PPIAL4AQ9Y536 164 aa3.01□□□□□ -1.93
LRCH3-211ENST00000466054 USP16Q9Y5T5 823 aa3.01□□□□□ -1.93
LRCH3-211ENST00000466054 ESYT2A0FGR8 921 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 MAPK13O15264 365 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 CTAGE5O15320 804 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 STX7O15400 261 aaKnown RBP3□□□□□ -1.93
LRCH3-211ENST00000466054 DIRAS3O95661 229 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 ZNF19P17023 458 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 SERPINA2P20848 420 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 MDH1P40925 334 aaKnown RBP3□□□□□ -1.93
LRCH3-211ENST00000466054 STARP49675 285 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 KYAT1Q16773 422 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 LRRC36Q1X8D7 754 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 ASPHD2Q6ICH7 369 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 DNM1P46Q6ZS02 220 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 OR2T33Q8NG76 320 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 CNIH3Q8TBE1 160 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 M1APQ8TC57 530 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 AENQ8WTP8 325 aaKnown RBP3□□□□□ -1.93
LRCH3-211ENST00000466054 HAVCR1Q96D42 359 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 CYYR1Q96J86 154 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 SMIM14Q96QK8 99 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 OR5B2Q96R09 309 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 ZNF184Q99676 751 aaPredicted RBP3□□□□□ -1.93
LRCH3-211ENST00000466054 ZNF416Q9BWM5 594 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 NMUR2Q9GZQ4 415 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 PDFQ9HBH1 243 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 WRAP73Q9P2S5 460 aaPredicted RBP3□□□□□ -1.93
LRCH3-211ENST00000466054 ONECUT1Q9UBC0 465 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 WDR45Q9Y484 360 aa3□□□□□ -1.93
LRCH3-211ENST00000466054 IGHV7-81A0A0B4J1V7 117 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 LOC100131303A0A0U1RQF7 123 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 SMIM28A0A1B0GU29 152 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 A0A1W2PNV4 684 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 B3GAT3O94766 335 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 IGF1P05019 195 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 IGLL1P15814 213 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 MAGEA5P43359 124 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 OR3A4PP47883 348 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 HLCSP50747 726 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 LIM2P55344 173 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 ST3GAL3Q11203 375 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 ELAVL3Q14576 367 aaKnown RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 TMEM52BQ4KMG9 183 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 SYT10Q6XYQ8 523 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 SCARA5Q6ZMJ2 495 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 APTXQ7Z2E3 356 aaKnown RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 DPY19L4Q7Z388 723 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 ZNF573Q86YE8 665 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 CEND1Q8N111 149 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 OR2L5Q8NG80 312 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 SETD7Q8WTS6 366 aaKnown RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 C16orf74Q96GX8 76 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 C16orf45Q96MC5 204 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 ZIM3Q96PE6 472 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 CNPY3Q9BT09 278 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 CRNKL1Q9BZJ0 848 aaKnown RBP2.99□□□□□ -1.93
LRCH3-211ENST00000466054 COQ10BQ9H8M1 238 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 AIPL1Q9NZN9 384 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 RIMS3Q9UJD0 308 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 ABCG2Q9UNQ0 655 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 OARD1Q9Y530 152 aa2.99□□□□□ -1.93
LRCH3-211ENST00000466054 SF3B1O75533 1304 aaKnown RBP eCLIP2.98□□□□□ -1.938e-6■■■□□ 17.8
LRCH3-211ENST00000466054 A0A1B0GWJ7 208 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 PP2D1A8MPX8 630 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 EFNA2O43921 213 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 IDH1O75874 414 aaKnown RBP2.98□□□□□ -1.93
LRCH3-211ENST00000466054 TBXA2RP21731 343 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 VDAC1P21796 283 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 GCKP35557 465 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 BDKRB1P46663 353 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 STX17P56962 302 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 ZNF45Q02386 682 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 LAGE3Q14657 143 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 AANATQ16613 207 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 MAPK6Q16659 721 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 CFAP221Q4G0U5 840 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 RABGAP1LQ5R372 815 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 RIPPLY2Q5TAB7 128 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 ACSM5Q6NUN0 579 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 ZNF544Q6NX49 715 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 HSD17B13Q7Z5P4 300 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-211ENST00000466054 TMEM179BQ7Z7N9 219 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 SKA3Q8IX90 412 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 OR10T2Q8NGX3 314 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 ANKRD49Q8WVL7 239 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 SLC5A11Q8WWX8 675 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 FRAT1Q92837 279 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-211ENST00000466054 NEIL2Q969S2 332 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 NOL4LQ96MY1 436 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-211ENST00000466054 IL4I1Q96RQ9 567 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 NICN1Q9BSH3 213 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 THUMPD2Q9BTF0 503 aaKnown RBP2.98□□□□□ -1.93
LRCH3-211ENST00000466054 RHOJQ9H4E5 214 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 CALHM2Q9HA72 323 aa2.98□□□□□ -1.93
LRCH3-211ENST00000466054 DCDC2Q9UHG0 476 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms