RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 CDHR4A6H8M9 788 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ARRDC5A6NEK1 342 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 NPIPB9F8W1W9 429 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 H3BNX3 289 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CASQ2O14958 399 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 RRP8O43159 456 aaKnown RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TSPAN2O60636 221 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 UGT2B17O75795 530 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SEC24DO94855 1032 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 PRSS23O95084 383 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SNX4O95219 450 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 OXSR1O95747 527 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CLPSP04118 112 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SEMG1P04279 462 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 HNRNPCP07910 306 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 LYNP07948 512 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CHRM4P08173 479 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FBXO45P0C2W1 286 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ANPEPP15144 967 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 NCK1P16333 377 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CDH2P19022 906 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CD247P20963 164 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ABCD3P28288 659 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 OTX2P32243 289 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 MSX2P35548 267 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 DCTP40126 519 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 HTR3AP46098 478 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 HMGA2P52926 109 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SUMO3P55854 103 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 MLF1P58340 268 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 COPZ1P61923 177 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CHRNEQ04844 493 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 C17orf67Q0P5P2 114 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FUT5Q11128 374 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ST3GAL3Q11203 375 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FGFBP1Q14512 234 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 GPR68Q15743 365 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 MAPK11Q15759 364 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 NTRK2Q16620 822 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 NRF1Q16656 503 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 KLHL26Q53HC5 615 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 DCAF10Q5QP82 559 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 BROXQ5VW32 411 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 OR2T5Q6IEZ7 315 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SLC30A6Q6NXT4 461 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TMEM53Q6P2H8 277 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ZNF613Q6PF04 617 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 C5orf46Q6UWT4 87 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SHISA6Q6ZSJ9 500 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 PPP1R32Q7Z5V6 425 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ZDHHC13Q8IUH4 622 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 C10orf111Q8N326 155 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TMEM156Q8N614 296 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 KDF1Q8NAX2 398 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 OR2T29Q8NH02 315 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ADAMTS17Q8TE56 1095 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 DNAJA4Q8WW22 397 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 KCNE4Q8WWG9 221 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 PYDC1Q8WXC3 89 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ASB15Q8WXK1 588 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 PIK3R3Q92569 461 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 PMEPA1Q969W9 287 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 EME1Q96AY2 570 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TAMM41Q96BW9 452 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 OMA1Q96E52 524 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 MPP4Q96JB8 637 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 HS6ST2Q96MM7 605 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 LMF1Q96S06 567 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SEPHS2Q99611 448 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 EPYCQ99645 322 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ZNF559Q9BR84 538 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TBL1XR1Q9BZK7 514 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 RNF32Q9H0A6 362 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 REEP1Q9H902 201 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 AKIRIN1Q9H9L7 192 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 C12orf10Q9HB07 376 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TMEM27Q9HBJ8 222 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CPNE5Q9HCH3 593 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 AGPAT4Q9NRZ5 378 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 SELENONQ9NZV5 590 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FBXL4Q9UKA2 621 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 MKLN1Q9UL63 735 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 TMCC3Q9ULS5 477 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ZNF443Q9Y2A4 671 aaPredicted RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 PCDHGB7Q9Y5F8 929 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ORC6Q9Y5N6 252 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 ENPP4Q9Y6X5 453 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FRYLO94915 3013 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 CNOT1A5YKK6 2376 aaKnown RBP5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FER1L5A0AVI2 2057 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 TEX51A0A1B0GUA7 166 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 MYOCOSA0A1B0GUC4 107 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 A0A1W2PRQ8 180 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 PRAMEF27A3QJZ7 478 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 OR2W5A6NFC9 320 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 SERINC4A6NH21 518 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 GTPBP1O00178 669 aaKnown RBP5.52□□□□□ -1.53
CHMP3-206ENST00000466032 HRKO00198 91 aa5.52□□□□□ -1.53
CHMP3-206ENST00000466032 AGRPO00253 132 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms