RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 AGAP5A6NIR3 686 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 FIGNL2A6NMB9 653 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ZNF264O43296 627 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 EIF4E2O60573 245 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CCDC22O60826 627 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 DNAJA2O60884 412 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HOXD4P09016 255 aaPredicted RBP13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 UBL4AP11441 157 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 GABRA1P14867 456 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 RPS4Y1P22090 263 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PGM1P36871 562 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 STARP49675 285 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HPCAP84074 193 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 NFYCQ13952 458 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 AAGABQ6PD74 315 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CPLX4Q7Z7G2 160 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HMGN2P46Q86SG4 172 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 DHDDSQ86SQ9 333 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ULK2Q8IYT8 1036 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 EID3Q8N140 333 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 OR5M1Q8NGP8 315 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 GPR119Q8TDV5 335 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ZNF524Q96C55 264 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 SFXN2Q96NB2 322 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PSMG3-AS1Q96PY0 264 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CGREF1Q99674 301 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 NPAS1Q99742 590 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CPPED1Q9BRF8 314 aaPredicted RBP13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CCDC106Q9BWC9 280 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 LAT2Q9GZY6 243 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 FAM107BQ9H098 131 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 A4GALTQ9NPC4 353 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ALKBH4Q9NXW9 302 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ARMCX1Q9P291 453 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 SUCOQ9UBS9 1254 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 VDAC3Q9Y277 283 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ZNF337Q9Y3M9 751 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 FAM215AQ9Y5M1 114 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 KIAA1549Q9HCM3 1950 aa13.94□□□□□ -0.18
RAB11FIP3-208ENST00000464263 DSPPQ9NZW4 1301 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 DOPEY2Q9Y3R5 2298 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 A0A0G2JPF8 293 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 LOC100653049A0A140TA62 436 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 C7orf72A4D263 438 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 EVPLLA8MZ36 301 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HNRNPCL2B2RXH8 293 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HNRNPCL3B7ZW38 293 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HNRNPCL1O60812 293 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 BCAS1O75363 584 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 KRT34O76011 436 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CSTAP01040 98 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 BCHEP06276 602 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 LINGO3P0C6S8 592 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 HNRNPCL4P0DMR1 293 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PSMA4P25789 261 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 GCKP35557 465 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CRISP3P54108 245 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 SUMO3P55854 103 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 KCNJ10P78508 379 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 MAPRE2Q15555 327 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 COQ5Q5HYK3 327 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 C1orf185Q5T7R7 199 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 RAET1LQ5VY80 246 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 TMEM211Q6ICI0 200 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ENPP6Q6UWR7 440 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 EIF3MQ7L2H7 374 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PIGWQ7Z7B1 504 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 MTDHQ86UE4 582 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 SNX32Q86XE0 403 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PM20D2Q8IYS1 436 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 FAM71CQ8NEG0 241 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 OR5W2Q8NH69 310 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 MAL2Q969L2 176 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ARSGQ96EG1 525 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 TMEM19Q96HH6 336 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 TREX2Q9BQ50 279 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PIGQQ9BRB3 760 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 TTYH2Q9BSA4 534 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 TRIM8Q9BZR9 551 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 NSRP1Q9H0G5 558 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CALML5Q9NZT1 146 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CORO2BQ9UQ03 480 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CAMK2AQ9UQM7 478 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CAPN7Q9Y6W3 813 aa13.93□□□□□ -0.18
RAB11FIP3-208ENST00000464263 CLDN24A6NM45 220 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 SHISA8B8ZZ34 492 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 LINC01387J3KSC0 135 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 EPPINO95925 133 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 NPPAP01160 153 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 DBIP07108 87 aaKnown RBP13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 GLI4P10075 376 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ARAFP10398 606 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PEPDP12955 493 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 ZNF708P17019 499 aa13.92□□□□□ -0.18
RAB11FIP3-208ENST00000464263 PTGER4P35408 488 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms