RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 SMAP2Q8WU79 429 aaPredicted RBP13.96□□□□□ -0.17
SND1-203ENST00000463020 ROBO4Q8WZ75 1007 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 ZBED6CLQ96FA7 236 aaPredicted RBP13.96□□□□□ -0.17
SND1-203ENST00000463020 LRRC37BQ96QE4 947 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 PRRG4Q9BZD6 226 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 GLIPR2Q9H4G4 154 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 PTGES2Q9H7Z7 377 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 RNF115Q9Y4L5 304 aa13.96□□□□□ -0.17
SND1-203ENST00000463020 CADP27708 2225 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 IGHV4-30-2A0A087WSY4 118 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 ADAMDEC1O15204 470 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 RAMP1O60894 148 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 TMCC2O75069 709 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 BGNP21810 368 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 EDNRAP25101 427 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
SND1-203ENST00000463020 CLCQ05315 142 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 CSTF3Q12996 717 aaKnown RBP13.95□□□□□ -0.18
SND1-203ENST00000463020 DECR1Q16698 335 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 KRTAP24-1Q3LI83 254 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 ZNF672Q499Z4 452 aaPredicted RBP13.95□□□□□ -0.18
SND1-203ENST00000463020 PODNL1Q6PEZ8 512 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 FIGNL1Q6PIW4 674 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 TFAP2EQ6VUC0 442 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 LSRQ86X29 649 aaPredicted RBP13.95□□□□□ -0.18
SND1-203ENST00000463020 GABRG1Q8N1C3 465 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 OR2L13Q8N349 312 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 OR4C3Q8NH37 302 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 CDC26Q8NHZ8 85 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 ABHD3Q8WU67 409 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 C10orf82Q8WW14 230 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 FBXW5Q969U6 566 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 RNF145Q96MT1 663 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 RAB3IPQ96QF0 476 aaPredicted RBP13.95□□□□□ -0.18
SND1-203ENST00000463020 BBS4Q96RK4 519 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 LMF2Q9BU23 707 aaKnown RBP13.95□□□□□ -0.18
SND1-203ENST00000463020 SRXN1Q9BYN0 137 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 NPHS2Q9NP85 383 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 FBXO34Q9NWN3 711 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 GPR52Q9Y2T5 361 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 TIMM22Q9Y584 194 aa13.95□□□□□ -0.18
SND1-203ENST00000463020 A0A087WV62 115 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 A0A1W2PRB8 838 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 DPRXA6NFQ7 191 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 EFNA2O43921 213 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 HNRNPCL1O60812 293 aaKnown RBP13.94□□□□□ -0.18
SND1-203ENST00000463020 DDCP20711 480 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 IDUAP35475 653 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 RASSF2P50749 326 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 RNF144AP50876 292 aaPredicted RBP13.94□□□□□ -0.18
SND1-203ENST00000463020 ARFIP2P53365 341 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 FOXA1P55317 472 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 NCALDP61601 193 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 PSPHP78330 225 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 PRR5P85299 388 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 BSPH1Q075Z2 132 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 PLPPR5Q32ZL2 321 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 BEND4Q6ZU67 534 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 GTPBP8Q8N3Z3 284 aaPredicted RBP13.94□□□□□ -0.18
SND1-203ENST00000463020 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 FBXO30Q8TB52 745 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.94□□□□□ -0.18
SND1-203ENST00000463020 HTRA1Q92743 480 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 GTPBP3Q969Y2 492 aaKnown RBP13.94□□□□□ -0.18
SND1-203ENST00000463020 ZNF524Q96C55 264 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 AMDHD1Q96NU7 426 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 MRPL57Q9BQC6 102 aaKnown RBP13.94□□□□□ -0.18
SND1-203ENST00000463020 TBL1XR1Q9BZK7 514 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 TRIM2Q9C040 744 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 MRPL46Q9H2W6 279 aaKnown RBP13.94□□□□□ -0.18
SND1-203ENST00000463020 EQTNQ9NQ60 294 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
SND1-203ENST00000463020 FREM1Q5H8C1 2179 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 OIP5O43482 229 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 TLX2O43763 284 aaPredicted RBP13.93□□□□□ -0.18
SND1-203ENST00000463020 COQ9O75208 318 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 TP53P04637 393 aaPredicted RBP13.93□□□□□ -0.18
SND1-203ENST00000463020 BPGMP07738 259 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 ANXA4P09525 319 aaPredicted RBP13.93□□□□□ -0.18
SND1-203ENST00000463020 HSD3B1P14060 373 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 NQO1P15559 274 aaKnown RBP13.93□□□□□ -0.18
SND1-203ENST00000463020 ZNF17P17021 662 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 HSD3B2P26439 372 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 GABRA3P34903 492 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 MPIP34949 423 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 ACSM2AQ08AH3 577 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 STX3Q13277 289 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 HEPACAMQ14CZ8 416 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 ACSM2BQ68CK6 577 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 FAM71E1Q6IPT2 247 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 GALNT18Q6P9A2 607 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 TUSC5Q8IXB3 177 aa13.93□□□□□ -0.18
SND1-203ENST00000463020 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms