RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SLC6A8P48029 635 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 PLGLB1Q02325 96 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 RIPPLY1Q0D2K3 151 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 PDE7AQ13946 482 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 TMEM52BQ4KMG9 183 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 POGLUT1Q8NBL1 392 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 AMDHD1Q96NU7 426 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 URM1Q9BTM9 101 aaKnown RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 ELAVL4P26378 380 aaKnown RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 GLP1RP43220 463 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 LRRC37A5PQ49AS3 106 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 NAXEQ8NCW5 288 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 SPPL3Q8TCT6 385 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF486Q96H40 463 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CCDC120Q96HB5 630 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 GSKIPQ9P0R6 139 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 A0A1B0GTL3 188 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 WASHC1A8K0Z3 465 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 H0YGG7 62 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 HPGDSO60760 199 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 XCR1P46094 333 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 ARF3P61204 181 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 VAMP2P63027 116 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 MRPL2Q5T653 305 aaKnown RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 WASH2PQ6VEQ5 465 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 ELP5Q8TE02 316 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 TAS2R16Q9NYV7 291 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CA14Q9ULX7 337 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 MEIOCA2RUB1 952 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 FAM227AF5H4B4 570 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 TSPAN12O95859 305 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 NR4A2P43354 598 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 ERVK-25P63136 954 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 TNFRSF17Q02223 184 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 MFSD13AQ14CX5 517 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CDNFQ49AH0 187 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CARD17Q5XLA6 110 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CYHR1Q6ZMK1 362 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 STX12Q86Y82 276 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 SLC22A8Q8TCC7 542 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 UBE2FQ969M7 185 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 THAP7Q9BT49 309 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CENPOQ9BU64 300 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 HHATLQ9HCP6 504 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 TESQ9UGI8 421 aaKnown RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 RARRES3Q9UL19 164 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 FZD6O60353 706 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 SCGB1D2O95969 90 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 C1QAP02745 245 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 UBL4AP11441 157 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 MAN2A2P49641 1150 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 CSNK1G2P78368 415 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 C3orf38Q5JPI3 329 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 C18orf63Q68DL7 685 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ANKRD54Q6NXT1 300 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 PKMYT1Q99640 499 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 DPCDQ9BVM2 203 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 MED17Q9NVC6 651 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 RASD1Q9Y272 281 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 TRBV5-4A0A0C4DH59 114 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 TCRBV5S2A0A599 114 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 B4GALT3O60512 393 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 SCG5P05408 212 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 HOXA9P31269 272 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF84P51523 738 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 CAPZA1P52907 286 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ACTBP60709 375 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ACTG1P63261 375 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 TMEM205Q6UW68 189 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 CCDC28AQ8IWP9 274 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ARL6Q9H0F7 186 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 PPIL3Q9H2H8 161 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 CA5BQ9Y2D0 317 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ABCA3Q99758 1704 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 PLPP1O14494 284 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 FARS2O95363 451 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 PTGS2P35354 604 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 SNRPD2P62316 118 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 BHLHA9Q7RTU4 235 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 RNF113BQ8IZP6 322 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 GPR148Q8TDV2 347 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 C17orf50Q8WW18 174 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 OR5M11Q96RB7 305 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 MYADMQ96S97 322 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 MEPEQ9NQ76 525 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 POT1Q9NUX5 634 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 CACNG2Q9Y698 323 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 TRAV18A0A075B6X5 111 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 MEGF11A6BM72 1044 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 SYT5O00445 386 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 RBMXP38159 391 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 NKX3-2P78367 333 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 RNASE10Q5GAN6 216 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 FOXB2Q5VYV0 432 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 COQ8AQ8NI60 647 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 TOE1Q96GM8 510 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 PGAM5Q96HS1 289 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms