RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TMEM239Q8WW34 195 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 SCARF2Q96GP6 870 aaPredicted RBP16.84■□□□□ 0.29
HPS3-202ENST00000460120 GABRG3Q99928 467 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 TP63Q9H3D4 680 aaPredicted RBP16.84■□□□□ 0.29
HPS3-202ENST00000460120 SIDT1Q9NXL6 827 aaKnown RBP16.84■□□□□ 0.29
HPS3-202ENST00000460120 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.84■□□□□ 0.29
HPS3-202ENST00000460120 STX11O75558 287 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 TBXA2RP21731 343 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 GPR50Q13585 617 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 KIR2DS3Q14952 304 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 MRGPREQ86SM8 312 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 OR13H1Q8NG92 308 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 OR4N2Q8NGD1 307 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 OR52L1Q8NGH7 329 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 CD180Q99467 661 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 CCDC3Q9BQI4 270 aa16.84■□□□□ 0.29
HPS3-202ENST00000460120 TCRBV21S2A2A0A5A6 115 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 TRAPPC13A5PLN9 417 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 MAGEB4O15481 346 aaPredicted RBP16.83■□□□□ 0.29
HPS3-202ENST00000460120 KLF4O43474 513 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 TCEA1P23193 301 aaKnown RBP16.83■□□□□ 0.29
HPS3-202ENST00000460120 NOS3P29474 1203 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 HTR1FP30939 366 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 TPMTP51580 245 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 ERV3-1Q14264 604 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 ARL9Q6T311 187 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 RPTNQ6XPR3 784 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 UBE2Q1Q7Z7E8 422 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 ZNF619Q8N2I2 560 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 CAMKVQ8NCB2 501 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 MSLNLQ96KJ4 702 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 RIPOR3Q96MK2 946 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 TTYH2Q9BSA4 534 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 CLDND1Q9NY35 253 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 CLCA3PQ9Y6N3 262 aa16.83■□□□□ 0.29
HPS3-202ENST00000460120 IRGMA1A4Y4 181 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 MEIOCA2RUB1 952 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 FAM25AB3EWG3 89 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 FAM25CB3EWG5 89 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 FAM25GB3EWG6 89 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 AKAP8O43823 692 aaKnown RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 BMP7P18075 431 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 HNRNPA2B1P22626 353 aaKnown RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 TBRG1Q3YBR2 411 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 ZNF322Q6U7Q0 402 aaPredicted RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 OR51L1Q8NGJ5 315 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 OR9A4Q8NGU2 314 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 TM4SF19Q96DZ7 209 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 ZNF486Q96H40 463 aaPredicted RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 WDFY2Q96P53 400 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 PIGUQ9H490 435 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 MRPS18AQ9NVS2 196 aaKnown RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 NUFIP1Q9UHK0 495 aaKnown RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 CCDC182A6NF36 153 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 POLR1CO15160 346 aaPredicted RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 RFPL3O75679 317 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 HCCSP53701 268 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 KIAA1024LP59773 190 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 SLC3A1Q07837 685 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 ILF3Q12906 894 aaKnown RBP eCLIP16.83■□□□□ 0.28
HPS3-202ENST00000460120 IDNKQ5T6J7 187 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 ZNF544Q6NX49 715 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 USP53Q70EK8 1073 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 METTL27Q8N6F8 245 aaPredicted RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 CSNK1A1LQ8N752 337 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 ZNF485Q8NCK3 441 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 CNOT9Q92600 299 aaKnown RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 ALG8Q9BVK2 526 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 CLEC4AQ9UMR7 237 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 C19orf53Q9UNZ5 99 aaPredicted RBP16.83■□□□□ 0.28
HPS3-202ENST00000460120 PIAS3Q9Y6X2 628 aa16.83■□□□□ 0.28
HPS3-202ENST00000460120 ATG2AQ2TAZ0 1938 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 MN1Q10571 1320 aaPredicted RBP16.82■□□□□ 0.28
HPS3-202ENST00000460120 A0A1W2PPK0 400 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 DAPL1A0PJW8 107 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 URADA6NGE7 173 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 E9PI62 339 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 HRKO00198 91 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 SLC2A2P11168 524 aaPredicted RBP16.82■□□□□ 0.28
HPS3-202ENST00000460120 NDUFAF6Q330K2 333 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 ZNF362Q5T0B9 420 aaPredicted RBP16.82■□□□□ 0.28
HPS3-202ENST00000460120 VASNQ6EMK4 673 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 XKRXQ6PP77 449 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 CADM2Q8N3J6 435 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 OR52R1Q8NGF1 315 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 ZNF350Q9GZX5 532 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 SLC28A3Q9HAS3 691 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 CPNE7Q9UBL6 633 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 PILRAQ9UKJ1 303 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 PCDHGB2Q9Y5G2 931 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 OR10H2O60403 315 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 PPP1R3DO95685 299 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 CTBP2P56545 445 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 RAB25P57735 213 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 DUSP8Q13202 625 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 Q8N402 240 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 SCAIQ8N9R8 606 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 OR6F1Q8NGZ6 308 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 AP3S1Q92572 193 aa16.82■□□□□ 0.28
HPS3-202ENST00000460120 BPIFA2Q96DR5 249 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms