RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 WNT2BQ93097 391 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 MAGEB18Q96M61 343 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 UCN2Q96RP3 112 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 NPAS1Q99742 590 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 TM9SF2Q99805 663 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 TREX2Q9BQ50 279 aaPredicted RBP12.87□□□□□ -0.35
THBS3-204ENST00000460050 EBF4Q9BQW3 602 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 TRIM8Q9BZR9 551 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 NMUR2Q9GZQ4 415 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 ZNF350Q9GZX5 532 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 ACBD3Q9H3P7 528 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
THBS3-204ENST00000460050 CARD8Q9Y2G2 431 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 DTNAQ9Y4J8 743 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 AP4B1Q9Y6B7 739 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 HEATR5AQ86XA9 2040 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 C7orf72A4D263 438 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 GTPBP1O00178 669 aaKnown RBP12.86□□□□□ -0.35
THBS3-204ENST00000460050 RFXANKO14593 260 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 FCMRO60667 390 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 NUDT14O95848 222 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 TMIGD3P0DMS9 266 aaPredicted RBP12.86□□□□□ -0.35
THBS3-204ENST00000460050 CTSSP25774 331 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 POLR2JP52435 117 aaKnown RBP12.86□□□□□ -0.35
THBS3-204ENST00000460050 AQP5P55064 265 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 CLDN15P56746 228 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 STX1BP61266 288 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 FUT5Q11128 374 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 NDUFAF6Q330K2 333 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 TIGD2Q4W5G0 525 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 CBLN3Q6UW01 205 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 CHMP1BQ7LBR1 199 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 RNF130Q86XS8 419 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 GTPBP8Q8N3Z3 284 aaPredicted RBP12.86□□□□□ -0.35
THBS3-204ENST00000460050 ZBTB8AQ96BR9 441 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 ROPN1LQ96C74 230 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 RNF145Q96MT1 663 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 ZFP3Q96NJ6 502 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 KCNE5Q9UJ90 142 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 MKLN1Q9UL63 735 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 WDR45Q9Y484 360 aa12.86□□□□□ -0.35
THBS3-204ENST00000460050 FAM234BA2RU67 622 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 SERINC4A6NH21 518 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 HMGN4O00479 90 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 KIAA0513O60268 411 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 UGT2B17O75795 530 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 RCBTB2O95199 551 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 TGM6O95932 706 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 LINGO3P0C6S8 592 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 UBL4AP11441 157 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 ASCL1P50553 236 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 P2RX1P51575 399 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 AGFG1P52594 562 aaKnown RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 SUMO3P55854 103 aaPredicted RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 FOXF2Q12947 444 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 ZNF141Q15928 474 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 MSANTD1Q6ZTZ1 278 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 GGNQ86UU5 652 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 DMRTC2Q8IXT2 367 aaPredicted RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 TMCO5AQ8N6Q1 288 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 RFWD2Q8NHY2 731 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 PNPT1Q8TCS8 783 aaKnown RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 VPS33AQ96AX1 596 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 INTS12Q96CB8 462 aaKnown RBP12.85□□□□□ -0.35
THBS3-204ENST00000460050 ITCHQ96J02 903 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 RMND5AQ9H871 391 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 POLE3Q9NRF9 147 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 SLC6A13Q9NSD5 602 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 STOML1Q9UBI4 398 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 CREBBPQ92793 2442 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 POLQO75417 2590 aa12.85□□□□□ -0.35
THBS3-204ENST00000460050 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 EEF1E1-BLOC1S5C9J1V9 151 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 ZNF264O43296 627 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 EEF1E1O43324 174 aaKnown RBP12.84□□□□□ -0.35
THBS3-204ENST00000460050 EIF4E2O60573 245 aaKnown RBP12.84□□□□□ -0.35
THBS3-204ENST00000460050 ANP32DO95626 131 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 KRT75O95678 551 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 IL18BPO95998 194 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 GUSBP08236 651 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
THBS3-204ENST00000460050 OPRM1P35372 400 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
THBS3-204ENST00000460050 CCR4P51679 360 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 DLX5P56178 289 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 RPS3AP61247 264 aaKnown RBP12.84□□□□□ -0.35
THBS3-204ENST00000460050 TXNL4AP83876 142 aaKnown RBP12.84□□□□□ -0.35
THBS3-204ENST00000460050 HPCAP84074 193 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 FOXF1Q12946 379 aa12.84□□□□□ -0.35
THBS3-204ENST00000460050 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms