RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 A4GALTQ9NPC4 353 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 P2RX2Q9UBL9 471 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 ICAM5Q9UMF0 924 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 CORO2BQ9UQ03 480 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 CACNA1CQ13936 2221 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 DSPPQ9NZW4 1301 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 A0A0G2JPF8 293 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CLEC18AA5D8T8 446 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HNRNPCL2B2RXH8 293 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HNRNPCL3B7ZW38 293 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 EIF4E2O60573 245 aaKnown RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HNRNPCL1O60812 293 aaKnown RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 DNAJA2O60884 412 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 BCHEP06276 602 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HNRNPCL4P0DMR1 293 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 ARAFP10398 606 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 SLC6A2P23975 617 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PRDX6P30041 224 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PTGS2P35354 604 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PGM1P36871 562 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 RNF144AP50876 292 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CRISP3P54108 245 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 GFRA1P56159 465 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 DSCR4P56555 118 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 MTPNP58546 118 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 KCNJ10P78508 379 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF117Q03924 483 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 FGFBP1Q14512 234 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 TOMM20Q15388 145 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 GXYLT1Q4G148 440 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 NHSL2Q5HYW2 709 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 EMC4Q5J8M3 183 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 WIPI1Q5MNZ9 446 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 GCNT6Q5T4J0 391 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 GKAP1Q5VSY0 366 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PRAMEF8Q5VWM4 474 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PRAMEF7Q5VXH5 474 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 FAM91A1Q658Y4 838 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HIST2H2BCQ6DN03 193 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 VASNQ6EMK4 673 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CLEC18BQ6UXF7 455 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HMGN2P46Q86SG4 172 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PTOV1Q86YD1 416 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 DOLPP1Q86YN1 238 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 METTL25Q8N6Q8 603 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF511Q8NB15 262 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PCYOX1LQ8NBM8 494 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CLEC18CQ8NCF0 446 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 OR4K17Q8NGC6 315 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 B4GALNT2Q8NHY0 566 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF524Q96C55 264 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 RCN3Q96D15 328 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CMTM5Q96DZ9 223 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 C1GALT1C1Q96EU7 318 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 LRRC37BQ96QE4 947 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 GPATCH1Q9BRR8 931 aaKnown RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 RSPO3Q9BXY4 272 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 LAT2Q9GZY6 243 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 TMEM38AQ9H6F2 299 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 PTGES2Q9H7Z7 377 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 EFCAB1Q9HAE3 211 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 HHATLQ9HCP6 504 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 GID8Q9NWU2 228 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 TAS2R10Q9NYW0 307 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CALML5Q9NZT1 146 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 SPRR3Q9UBC9 169 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 SUCOQ9UBS9 1254 aaKnown RBP9.12□□□□□ -0.95
ATG4A-206ENST00000457035 OSGIN2Q9Y236 505 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 CARD8Q9Y2G2 431 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 SLC6A5Q9Y345 797 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 KIAA1549Q9HCM3 1950 aa9.12□□□□□ -0.95
ATG4A-206ENST00000457035 UTP20O75691 2785 aaKnown RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 OR14I1A6ND48 311 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 CLDN24A6NM45 220 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 NPIPA2E9PIF3 369 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 NPIPA3F8WFD2 350 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 H3BNH8 94 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 GTPBP1O00178 669 aaKnown RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 AIM2O14862 343 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF264O43296 627 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 HCRTR2O43614 444 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 SLC19A2O60779 497 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 BCAS1O75363 584 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 DCTN3O75935 186 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 PGM3O95394 542 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 BMP7P18075 431 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 P2RX1P51575 399 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 HPCAP84074 193 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 CDK6Q00534 326 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 PLAURQ03405 335 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 RBPJQ06330 500 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 CRYZQ08257 329 aaKnown RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 GNA13Q14344 377 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 GANABQ14697 944 aaKnown RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 C3AR1Q16581 482 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF630Q2M218 657 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms