RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 LIMS1P48059 325 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 RPP38P78345 283 aaKnown RBP15.23■□□□□ 0.03
LINC00963-208ENST00000454968 SLC34A1Q06495 639 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 MFAP5Q13361 173 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 GK3PQ14409 553 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 ABHD17BQ5VST6 288 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 OR2T5Q6IEZ7 315 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 INO80CQ6PI98 192 aaPredicted RBP15.23■□□□□ 0.03
LINC00963-208ENST00000454968 IL20RBQ6UXL0 311 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 RTL4Q6ZR62 310 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 ZNF550Q7Z398 422 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 TMEM156Q8N614 296 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 OR2T29Q8NH02 315 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 NR4A3Q92570 626 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 CENPNQ96H22 339 aaPredicted RBP15.23■□□□□ 0.03
LINC00963-208ENST00000454968 PRRC1Q96M27 445 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 ANGPTL4Q9BY76 406 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 TBL1XR1Q9BZK7 514 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 HPF1Q9NWY4 346 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 STMN3Q9NZ72 180 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 CNIH4Q9P003 139 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 SLC13A4Q9UKG4 626 aa15.23■□□□□ 0.03
LINC00963-208ENST00000454968 TNRC6AQ8NDV7 1962 aaKnown RBP15.23■□□□□ 0.03
LINC00963-208ENST00000454968 RRP8O43159 456 aaKnown RBP15.22■□□□□ 0.03
LINC00963-208ENST00000454968 OIP5O43482 229 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 FRS3O43559 492 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 NDUFB5O43674 189 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 NEURL1O76050 574 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 CST1P01037 141 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 LDLRP01130 860 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 PRG2P13727 222 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 HTR2AP28223 471 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 CYB561P49447 251 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 DLX5P56178 289 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 RGS8P57771 180 aaPredicted RBP15.22■□□□□ 0.03
LINC00963-208ENST00000454968 C17orf67Q0P5P2 114 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 EPS8Q12929 822 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 TUBA3CQ13748 450 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 AGAP7PQ5VUJ5 663 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 SLC30A6Q6NXT4 461 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 TUBA3EQ6PEY2 450 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 CBLN3Q6UW01 205 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 ISLR2Q6UXK2 745 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 CCDC81Q6ZN84 652 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 MARCH3Q86UD3 253 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 OFCC1Q8IZS5 231 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 PIK3C3Q8NEB9 887 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 ARSGQ96EG1 525 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 AGAP4Q96P64 663 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 PIP5K1AQ99755 562 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 FUZQ9BT04 418 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 WIF1Q9Y5W5 379 aa15.22■□□□□ 0.03
LINC00963-208ENST00000454968 ETV2O00321 342 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-208ENST00000454968 CCL3P10147 92 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 CD96P40200 585 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 CLK3P49761 638 aaKnown RBP15.21■□□□□ 0.03
LINC00963-208ENST00000454968 SUMO3P55854 103 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-208ENST00000454968 ZNF117Q03924 483 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 DEFB109BQ30KR1 87 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 SLC22A10Q63ZE4 541 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 CYP4Z2PQ8N1L4 340 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 ZNF614Q8N883 585 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 FDCSPQ8NFU4 85 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 OR5M3Q8NGP4 307 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 VANGL1Q8TAA9 524 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-208ENST00000454968 PHOSPHO1Q8TCT1 267 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 HAS2Q92819 552 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 BDH2Q9BUT1 245 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 MAN2C1Q9NTJ4 1040 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 ACER3Q9NUN7 267 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 VNN3Q9NY84 501 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 GPR83Q9NYM4 423 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 ABI3Q9P2A4 366 aa15.21■□□□□ 0.03
LINC00963-208ENST00000454968 ZZEF1O43149 2961 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 A0A1W2PRQ8 180 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 MED19A0JLT2 244 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-208ENST00000454968 J3KTA2 159 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 TAF4O00268 1085 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 ADAMDEC1O15204 470 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 DIRAS1O95057 198 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 OR5F1O95221 314 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 LYPD3O95274 346 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 THY1P04216 161 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 UBTFL6P0CB48 400 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-208ENST00000454968 GKN3PP0CG01 181 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 THRBP10828 461 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 UCNP55089 124 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 DGCR6Q14129 220 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 NDUFAF6Q330K2 333 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 BICRALQ6AI39 1079 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 ZNF613Q6PF04 617 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 MDGA2Q7Z553 956 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 AMIGO2Q86SJ2 522 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 RANBP3LQ86VV4 465 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-208ENST00000454968 FADS6Q8N9I5 356 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 MDS2Q8NDY4 140 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 OR4C15Q8NGM1 316 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 NRBF2Q96F24 287 aa15.2■□□□□ 0.02
LINC00963-208ENST00000454968 SMAD5Q99717 465 aaKnown RBP15.2■□□□□ 0.02
LINC00963-208ENST00000454968 ZNF559Q9BR84 538 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms