RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 GLYR1Q49A26 553 aaPredicted RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 GCNT6Q5T4J0 391 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 WLSQ5T9L3 541 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 PRAMEF8Q5VWM4 474 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 PRAMEF7Q5VXH5 474 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 ARSKQ6UWY0 536 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 FAM26EQ8N5C1 309 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 POU5F2Q8N7G0 328 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 PCYOX1LQ8NBM8 494 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 ABTB1Q969K4 478 aaPredicted RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 TREX2Q9BQ50 279 aaPredicted RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 THUMPD3Q9BV44 507 aaKnown RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 UGT2B28Q9BY64 529 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 TRIM8Q9BZR9 551 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 BCL2L10Q9HD36 194 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 SH3BGRL2Q9UJC5 107 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 RPH3AQ9Y2J0 694 aaPredicted RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 A0A0G2JPF8 293 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 HNRNPCL2B2RXH8 293 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 HNRNPCL3B7ZW38 293 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 HNRNPCL1O60812 293 aaKnown RBP25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 HNRNPCL4P0DMR1 293 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 UBL4AP11441 157 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 COX4I1P13073 169 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 CHMP24386 653 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 ADRM1Q16186 407 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 NDUFAF6Q330K2 333 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 NANOGP8Q6NSW7 305 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 EIF3MQ7L2H7 374 aaKnown RBP25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 HMGN2P46Q86SG4 172 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 FJX1Q86VR8 437 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 METTL25Q8N6Q8 603 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 OR5M9Q8NGP3 310 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 LAT2Q9GZY6 243 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 TMEM38AQ9H6F2 299 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 NANOGQ9H9S0 305 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 SLC35A3Q9Y2D2 325 aa25.36■■□□□ 1.65
SMARCC1-203ENST00000454240 A0A087WZY1 265 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 CCL21O00585 134 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 FAM107AO95990 144 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 CSTAP01040 98 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 GCKP35557 465 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 PGM1P36871 562 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 SUMO3P55854 103 aaPredicted RBP25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 KCNJ10P78508 379 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 SKP2Q13309 424 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 TMEM44Q2T9K0 475 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 DCST1Q5T197 706 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 FAM71CQ8NEG0 241 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 RCN3Q96D15 328 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 SFXN2Q96NB2 322 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 SLC39A3Q9BRY0 314 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 TP63Q9H3D4 680 aaPredicted RBP25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 KAT8Q9H7Z6 458 aaKnown RBP25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 GID8Q9NWU2 228 aa25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 PHF3Q92576 2039 aaKnown RBP25.35■■□□□ 1.65
SMARCC1-203ENST00000454240 DBIP07108 87 aaKnown RBP25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 TCEA1P23193 301 aaKnown RBP25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 RPS26P11Q5JNZ5 115 aaPredicted RBP25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 AAGABQ6PD74 315 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 PEX5LQ8IYB4 626 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 ANKS4BQ8N8V4 417 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 ARSGQ96EG1 525 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 PRDM14Q9GZV8 571 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 MED17Q9NVC6 651 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 VDAC3Q9Y277 283 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 MEMO1Q9Y316 297 aa25.34■■□□□ 1.65
SMARCC1-203ENST00000454240 ARHGAP21Q5T5U3 1957 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 CLDN24A6NM45 220 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 E9PLN8 166 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 DNAJA2O60884 412 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 BCAS1O75363 584 aaPredicted RBP25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 PGM3O95394 542 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 IL7RP16871 459 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 CDK6Q00534 326 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 PLAURQ03405 335 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 PLPPR5Q32ZL2 321 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 ZNF585AQ6P3V2 769 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 C3P1Q6ZMU1 363 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 CMIPQ8IY22 773 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 TOR1AIP2Q8NFQ8 470 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 OR8J3Q8NGG0 315 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 OR5W2Q8NH69 310 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 NFKBIDQ8NI38 313 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 GPR119Q8TDV5 335 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 WDR60Q8WVS4 1066 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 WDYHV1Q96HA8 205 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 SH3GL1Q99961 368 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 VKORC1Q9BQB6 163 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 PIGQQ9BRB3 760 aa25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 DIDO1Q9BTC0 2240 aaKnown RBP25.33■■□□□ 1.65
SMARCC1-203ENST00000454240 OR2M5A3KFT3 312 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 C7orf72A4D263 438 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 WIPF3A6NGB9 483 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 C5orf58C9J3I9 102 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 LINC01387J3KSC0 135 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 AGFG2O95081 481 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 LINGO3P0C6S8 592 aa25.32■■□□□ 1.64
SMARCC1-203ENST00000454240 UBTFL6P0CB48 400 aaPredicted RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms