RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NINQ8N4C6 2090 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 PIEZO2Q9H5I5 2752 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 A0A0G2JMM0 328 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 A0A1W2PPB8 328 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 A0A1W2PRS3 328 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 KIR3DP1A8MWS1 328 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 SYT5O00445 386 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 ATXN7O15265 892 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF264O43296 627 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 PDE5AO76074 875 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 GLSO94925 669 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 CSTAP01040 98 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 UBL4AP11441 157 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 KCNJ5P48544 419 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 MASP1P48740 699 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 MEOX1P50221 254 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 GPR85P60893 370 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 DMTNQ08495 405 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 TRAP1Q12931 704 aaKnown RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 SKP2Q13309 424 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 LY6DQ14210 128 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 NADK2Q4G0N4 442 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 EIPR1Q53HC9 387 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 MRPL2Q5T653 305 aaKnown RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF836Q6ZNA1 936 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 VRK2Q86Y07 508 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 EID3Q8N140 333 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF614Q8N883 585 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 FADS6Q8N9I5 356 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 WDSUB1Q8N9V3 476 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 TEX19Q8NA77 164 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 TOR1AIP2Q8NFQ8 470 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 PHOSPHO1Q8TCT1 267 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 LAT2Q9GZY6 243 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 TUBA8Q9NY65 449 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 ACTR3BQ9P1U1 418 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 ICAM5Q9UMF0 924 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 CHST2Q9Y4C5 530 aa10.56□□□□□ -0.72
SCN9A-204ENST00000452182 KMT2BQ9UMN6 2715 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-204ENST00000452182 PINLYPA6NC86 204 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 LRRC3CA6NJW4 275 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CLDN24A6NM45 220 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 G3V3Y1 287 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 GTPBP1O00178 669 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ACOT8O14734 319 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ARPC2O15144 300 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CBR3O75828 277 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 RASAL1O95294 804 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 F12P00748 615 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CD247P20963 164 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 MSX2P35548 267 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 P2RX1P51575 399 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SUMO3P55854 103 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SELENOWP63302 87 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 PLAURQ03405 335 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF117Q03924 483 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 INPP5JQ15735 1006 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 DUSP7Q16829 419 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CBLL1Q75N03 491 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 HMGN2P46Q86SG4 172 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 Q8NA96 180 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 GATSQ8NAP1 163 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 OR1J4Q8NGS1 313 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SLC26A7Q8TE54 656 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 POP5Q969H6 163 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 FAM162AQ96A26 154 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ARSGQ96EG1 525 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 DTNBP1Q96EV8 351 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 TTTY12Q9BZ98 90 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 PCDHAC1Q9H158 963 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 UBQLN3Q9H347 655 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 DCAF13Q9NV06 445 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 OLAHQ9NV23 265 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 DNAJB12Q9NXW2 375 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 RPS6KA6Q9UK32 745 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 BAG5Q9UL15 447 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SPENQ96T58 3664 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 B4DXG7 233 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SUV39H1O43463 412 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 HCRTR2O43614 444 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 TPST1O60507 370 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SORBS2O94875 1100 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 LGI1O95970 557 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 OPN1SWP03999 348 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 NCK1P16333 377 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 MS4A2Q01362 244 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 GANABQ14697 944 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 LRRC23Q53EV4 343 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CYBRD1Q53TN4 286 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 MTX3Q5HYI7 312 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 LCN8Q6JVE9 175 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CBLN3Q6UW01 205 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SLC22A16Q86VW1 577 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF440Q8IYI8 595 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CLIP4Q8N3C7 705 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms