RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 GGTA1PQ4G0N0 100 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 C10orf91Q5T1B1 145 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ANXA8L1Q5VT79 327 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 C18orf63Q68DL7 685 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PTRHD1Q6GMV3 140 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 KIAA1211LQ6NV74 962 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ZCCHC12Q6PEW1 402 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SMARCD3Q6STE5 483 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PRSS45Q7RTY3 260 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 DCUN1D3Q8IWE4 304 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 STK35Q8TDR2 534 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 MRPS31Q92665 395 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 FBXO17Q96EF6 278 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 CIPCQ9C0C6 399 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 C1GALT1Q9NS00 363 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ASH2LQ9UBL3 628 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 FBXW2Q9UKT8 454 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PCDHB10Q9UN67 800 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 GPR52Q9Y2T5 361 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 COL4A4P53420 1690 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 NAP1L6A6NFF2 107 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 RHPN2P1A8MT19 583 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 WASH3PC4AMC7 463 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 NEDD8-MDP1E9PL57 170 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 F5H5P2 479 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 GFYI3L273 518 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 TERTO14746 1132 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 H1F0P07305 194 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 RHOQP17081 205 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 HTR2AP28223 471 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PCBP3P57721 371 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 C21orf58P58505 322 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 CDK5Q00535 292 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 DUSP4Q13115 394 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SSX2Q16385 188 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SLC25A35Q3KQZ1 300 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 CDNFQ49AH0 187 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 C4orf17Q53FE4 359 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 OR7E24Q6IFN5 339 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 BAIAP2L2Q6UXY1 529 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ESPNLQ6ZVH7 1005 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SLC9B2Q86UD5 537 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 NKAIN4Q8IVV8 208 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 RNF113BQ8IZP6 322 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 RNF175Q8N4F7 328 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 HORMAD2Q8N7B1 307 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 POGLUT1Q8NBL1 392 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 OR4F15Q8NGB8 312 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 OR52N2Q8NGI0 321 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SMAP2Q8WU79 429 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 HMGB4Q8WW32 186 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 TRIM43Q96BQ3 446 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 MRPL38Q96DV4 380 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 SMARCD1Q96GM5 515 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SMIM14Q96QK8 99 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SLC35A5Q9BS91 424 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ADGRE3Q9BY15 652 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ALX4Q9H161 411 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 TLNRD1Q9H1K6 362 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 SLC32A1Q9H598 525 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 TCF7L1Q9HCS4 588 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 BPIFA1Q9NP55 256 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ATXN7L1Q9ULK2 861 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 CAMK2AQ9UQM7 478 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ANGPT4Q9Y264 503 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PCDHB1Q9Y5F3 818 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 A0A0G2JK05 382 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 LOC390937A0A1W2PQ73 354 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 COLCA2A8K830 154 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ANHXE9PGG2 379 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 CTDSPLO15194 276 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SLC31A2O15432 143 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 PIP5K1CO60331 668 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 NME6O75414 186 aaPredicted RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 KHDRBS3O75525 346 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 IL5P05113 134 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ZNF44P15621 663 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 GJA1P17302 382 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 DGKAP23743 735 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 EDNRBP24530 442 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 PSMA3P25788 255 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ABCD3P28288 659 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 LAP3P28838 519 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 CCND3P30281 292 aaPredicted RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 BDKRB2P30411 391 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 HOXA11P31270 313 aaPredicted RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 STAT5AP42229 794 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SLC11A2P49281 568 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 PPT1P50897 306 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 STARD6P59095 220 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 TAS2R60P59551 318 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 AP3S2P59780 193 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SPCS3P61009 180 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 PPIAP62937 165 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 SREBF2Q12772 1141 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 FAM27D1Q5T7N8 215 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 FRG2Q64ET8 278 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ADNP2Q6IQ32 1131 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 C3orf33Q6P1S2 294 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms