RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PRKAR1BP31321 381 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 FABP5Q01469 135 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 COX10Q12887 443 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 LARS2Q15031 903 aaKnown RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 NDUFA5Q16718 116 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 ARHGAP11BQ3KRB8 267 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 EOGTQ5NDL2 527 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 ZNF620Q6ZNG0 422 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 CEP19Q96LK0 163 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 KLHDC3Q9BQ90 382 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 UBQLN3Q9H347 655 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 C19orf53Q9UNZ5 99 aaPredicted RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 A0A0J9YY10 115 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 A8MUA0 341 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 LOC110117498-PIK3R3F6TDL0 507 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 SURF4O15260 269 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 PRODHO43272 600 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 NGFRP08138 427 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 SAGP10523 405 aaPredicted RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 MYL12AP19105 171 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 DAB2P98082 770 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 BAK1Q16611 211 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 DEFB133Q30KQ1 61 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 FAM27D1Q5T7N8 215 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 PRSS58Q8IYP2 241 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 CADM2Q8N3J6 435 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 PROKR2Q8NFJ6 384 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 SECISBP2Q96T21 854 aaKnown RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 SMURF1Q9HCE7 757 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 MEPEQ9NQ76 525 aaPredicted RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 WSB2Q9NYS7 404 aaPredicted RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 DIMT1Q9UNQ2 313 aaKnown RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 A0A1B0GVC2 190 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 A6NIN4 97 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 TEKQ02763 1124 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SLC36A4Q6YBV0 504 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 AKAP14Q86UN6 197 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 KLBQ86Z14 1044 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 ARL14Q8N4G2 192 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 LRRC17Q8N6Y2 441 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 ASB15Q8WXK1 588 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 MOAP1Q96BY2 351 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 GDF15Q99988 308 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 ZNF350Q9GZX5 532 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 PIGUQ9H490 435 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 NDUFB11Q9NX14 153 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 FLRT3Q9NZU0 649 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SIRT4Q9Y6E7 314 aaPredicted RBP13.71□□□□□ -0.21
SF1-211ENST00000448404 OR5K3A6NET4 321 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 DUXAA6NLW8 204 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SYT5O00445 386 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 ASNA1O43681 348 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 STX11O75558 287 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SDHBP21912 280 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 TSFMP43897 325 aaKnown RBP13.71□□□□□ -0.21
SF1-211ENST00000448404 PSG6Q00889 435 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 ZNF267Q14586 743 aaPredicted RBP13.71□□□□□ -0.21
SF1-211ENST00000448404 PGGHGQ32M88 737 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SNAP47Q5SQN1 464 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 CD300LDQ6UXZ3 194 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 RPTNQ6XPR3 784 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 RASSF6Q6ZTQ3 369 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 MBOAT2Q6ZWT7 520 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 GDPD3Q7L5L3 318 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 RFLNBQ8N5W9 214 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 TMEM99Q8N816 258 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 ZNF321PQ8N8H1 164 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 SPRYD4Q8WW59 207 aaPredicted RBP13.71□□□□□ -0.21
SF1-211ENST00000448404 NXF2Q9GZY0 626 aaKnown RBP13.71□□□□□ -0.21
SF1-211ENST00000448404 STUB1Q9UNE7 303 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
SF1-211ENST00000448404 NOTOA8MTQ0 251 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 PRAMEF26H0Y7S4 382 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 TNFRSF10CO14798 259 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 WNT4P56705 351 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 C1DQ13901 141 aaKnown RBP13.71□□□□□ -0.22
SF1-211ENST00000448404 SPANXN2Q5MJ10 180 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 ZNF619Q8N2I2 560 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.71□□□□□ -0.22
SF1-211ENST00000448404 TGM7Q96PF1 710 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 FOXQ1Q9C009 403 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 HOXD1Q9GZZ0 328 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 CBLCQ9ULV8 474 aa13.71□□□□□ -0.22
SF1-211ENST00000448404 CDHR4A6H8M9 788 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 SOX6P35712 828 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 SLC1A3P43003 542 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
SF1-211ENST00000448404 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 KIAA0895LQ68EN5 471 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 LAPTM4BQ86VI4 370 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 MCATQ8IVS2 390 aaKnown RBP13.7□□□□□ -0.22
SF1-211ENST00000448404 VWA5B2Q8N398 1253 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 LMX1AQ8TE12 382 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 ZNF486Q96H40 463 aaPredicted RBP13.7□□□□□ -0.22
SF1-211ENST00000448404 SLC38A2Q96QD8 506 aa13.7□□□□□ -0.22
SF1-211ENST00000448404 GSDMCQ9BYG8 508 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms