RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CLK1P49759 484 aaKnown RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 LIMK1P53667 647 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 TSTQ16762 297 aaKnown RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 PGGHGQ32M88 737 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 MINDY4Q4G0A6 757 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 WDR74Q6RFH5 385 aaPredicted RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 KANSL1Q7Z3B3 1105 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 TMPRSS9Q7Z410 1059 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 RNF113BQ8IZP6 322 aaKnown RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 CLDN22Q8N7P3 220 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 OR4C3Q8NH37 302 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 ZHX1-C8orf76Q96EF9 292 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 SENP5Q96HI0 755 aaPredicted RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 OPALINQ96PE5 141 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 OR1F2PQ96R84 312 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 G6PC3Q9BUM1 346 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 HHATLQ9HCP6 504 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 KRCC1Q9NPI7 259 aaPredicted RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 SIDT1Q9NXL6 827 aaKnown RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 IGKV3D-11A0A0A0MRZ8 115 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 A0A1B0GWA3 101 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 KDM4EB2RXH2 506 aaPredicted RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 APOL3O95236 402 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 EPHA8P29322 1005 aaPredicted RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 OPRL1P41146 370 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 RHAGQ02094 409 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 PRKCDQ05655 676 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 SSX1Q16384 188 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 ANKDD1AQ495B1 522 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 C19orf48Q6RUI8 117 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 HSDL2Q6YN16 418 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 MAMSTRQ6ZN01 415 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 ATCAYQ86WG3 371 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 SLC15A4Q8N697 577 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 ANKK1Q8NFD2 765 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 CLIP3Q96DZ5 547 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 RNF31Q96EP0 1072 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 TAPBPLQ9BX59 468 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 ENKD1Q9H0I2 346 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 RNF167Q9H6Y7 350 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 TMEM27Q9HBJ8 222 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 MEPEQ9NQ76 525 aaPredicted RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 DIMT1Q9UNQ2 313 aaKnown RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 ERGIC3Q9Y282 383 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 MMACHCQ9Y4U1 282 aa16.1■□□□□ 0.17
SMC6-206ENST00000446852 ASCC3Q8N3C0 2202 aaKnown RBP16.1■□□□□ 0.17
SMC6-206ENST00000446852 UNC119BA6NIH7 251 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 A8MUA0 341 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 RFPL3O75679 317 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 RPLP0P05388 317 aaKnown RBP16.09■□□□□ 0.17
SMC6-206ENST00000446852 HOXA6P31267 233 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 ATP12AP54707 1039 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 SLC37A1P57057 533 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 DSG2Q14126 1118 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 NDUFAF6Q330K2 333 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 ZNF829Q3KNS6 432 aaPredicted RBP16.09■□□□□ 0.17
SMC6-206ENST00000446852 RNLSQ5VYX0 342 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 PMS2CLQ68D20 193 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 MED25Q71SY5 747 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 GPR135Q8IZ08 494 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 NANOGP1Q8N7R0 232 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 ZNF501Q96CX3 271 aaPredicted RBP16.09■□□□□ 0.17
SMC6-206ENST00000446852 NDC1Q9BTX1 674 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 PRRG3Q9BZD7 231 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 DCSTAMPQ9H295 470 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 OR52D1Q9H346 318 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 OSGIN1Q9UJX0 560 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 PCDHGA3Q9Y5H0 932 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 CORINQ9Y5Q5 1042 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 CCDC163A0A0D9SF12 145 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 LOC100506127A0A0U1RQW1 187 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 CHP2O43745 196 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 SLC2A10O95528 541 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 HBQ1P09105 142 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 TBXA2RP21731 343 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 DGUOKQ16854 277 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 VWA2Q5GFL6 755 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 QSOX2Q6ZRP7 698 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 OR2T33Q8NG76 320 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 FANK1Q8TC84 345 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 BRIX1Q8TDN6 353 aaKnown RBP16.09■□□□□ 0.17
SMC6-206ENST00000446852 BPIFA2Q96DR5 249 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 SLIRPQ9GZT3 109 aaKnown RBP16.09■□□□□ 0.17
SMC6-206ENST00000446852 UBQLN3Q9H347 655 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 EVA1AQ9H8M9 152 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 FGF21Q9NSA1 209 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.09■□□□□ 0.17
SMC6-206ENST00000446852 PRODH2Q9UF12 536 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 CARD8Q9Y2G2 431 aa16.09■□□□□ 0.17
SMC6-206ENST00000446852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.08■□□□□ 0.17
SMC6-206ENST00000446852 RAB36O95755 333 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 TDGF1P13385 188 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 ETV5P41161 510 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 ETV1P50549 477 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 BIKQ13323 160 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 SPHARQ15513 63 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 C1orf189Q5VU69 101 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 OR7G1Q8NGA0 311 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms