RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 SLC9B1P1A6NJY1 282 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 MAN2B1O00754 1011 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 DVL2O14641 736 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 SOX30O94993 753 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 H2AFB2P0C5Z0 115 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 OR3A3P47888 321 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 PCBP4P57723 403 aaKnown RBP11.08□□□□□ -0.64
MSH6-204ENST00000445503 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
MSH6-204ENST00000445503 CDK5Q00535 292 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 AGERQ15109 404 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 METRNLQ641Q3 311 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 ASPGQ86U10 573 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 SDR9C7Q8NEX9 313 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 OR2T35Q8NGX2 323 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 UPRTQ96BW1 309 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 OR51J1Q9H342 316 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 B3GAT2Q9NPZ5 323 aa11.08□□□□□ -0.64
MSH6-204ENST00000445503 ZNF443Q9Y2A4 671 aaPredicted RBP11.08□□□□□ -0.64
MSH6-204ENST00000445503 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 TRBV2A0A0J9YWF9 115 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 LRRN3E7EW58 273 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 ZNF780AO75290 641 aaPredicted RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 NUDT14O95848 222 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 SOD1P00441 154 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 BLVRAP53004 296 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 TSPAN5P62079 268 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 GALK2Q01415 458 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 IRF4Q15306 451 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 GLYR1Q49A26 553 aaPredicted RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 MEPCEQ7L2J0 689 aaKnown RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 FBXL6Q8N531 539 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 LINC01555Q8NAE3 123 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 ACOT12Q8WYK0 555 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 MOAP1Q96BY2 351 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 SLC35A4Q96G79 324 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 LRRN3Q9H3W5 708 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 CA5BQ9Y2D0 317 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 TNFRSF10AO00220 468 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 STK25O00506 426 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 RGS13O14921 159 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 FZD7O75084 574 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 KAT7O95251 611 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 CLUP10909 449 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 AP2S1P53680 142 aaPredicted RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 LGALS3BPQ08380 585 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 CRMP1Q14194 572 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 CST6Q15828 149 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 PRRT3Q5FWE3 981 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 SIRT6Q8N6T7 355 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 RPLP0P6Q8NHW5 317 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 ZFAND1Q8TCF1 268 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 SMPDL3BQ92485 455 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 BPIFA2Q96DR5 249 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 MS4A6EQ96DS6 147 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 WDR34Q96EX3 536 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 SIDT1Q9NXL6 827 aaKnown RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 FKBP7Q9Y680 259 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 SLC22A31A6NKX4 558 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 ICMTO60725 284 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 RFPL3O75679 317 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 APODP05090 189 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 HTR1FP30939 366 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 OPRD1P41143 372 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 CLDN12P56749 244 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 HYAL4Q2M3T9 481 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 TSACCQ96A04 125 aaPredicted RBP11.07□□□□□ -0.64
MSH6-204ENST00000445503 ORAI1Q96D31 301 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 MSLNLQ96KJ4 702 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 PTCHD1Q96NR3 888 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 GINS4Q9BRT9 223 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 SLC38A1Q9H2H9 487 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 NANSQ9NR45 359 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 STARD5Q9NSY2 213 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 RDH8Q9NYR8 311 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 TRPM6Q9BX84 2022 aa11.07□□□□□ -0.64
MSH6-204ENST00000445503 BLOC1S5-TXNDC5H3BN57 136 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 EIF4EP06730 217 aaKnown RBP11.06□□□□□ -0.64
MSH6-204ENST00000445503 PITPNAQ00169 270 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 PON3Q15166 354 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 MRPL2Q5T653 305 aaKnown RBP11.06□□□□□ -0.64
MSH6-204ENST00000445503 SFXN4Q6P4A7 337 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 ZNF767PQ75MW2 155 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 ZNF761Q86XN6 746 aaPredicted RBP11.06□□□□□ -0.64
MSH6-204ENST00000445503 ARL14Q8N4G2 192 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 ZNF655Q8N720 491 aaPredicted RBP11.06□□□□□ -0.64
MSH6-204ENST00000445503 TMIEQ8NEW7 156 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 GHSRQ92847 366 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 HSPA12BQ96MM6 686 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 C1QTNF2Q9BXJ5 285 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 FGF20Q9NP95 211 aaPredicted RBP11.06□□□□□ -0.64
MSH6-204ENST00000445503 KLHL21Q9UJP4 597 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 MAFFQ9ULX9 164 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 SLC43A1O75387 559 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 RECKO95980 971 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 TRAPPC2P0DI81 140 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 TRAPPC2BP0DI82 140 aa11.06□□□□□ -0.64
MSH6-204ENST00000445503 PVRP15151 417 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms