RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 SELENOWP63302 87 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 MS4A2Q01362 244 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 LY6DQ14210 128 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 TIGD3Q6B0B8 471 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 OR5M10Q6IEU7 315 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.4□□□□□ -0.1
USP40-206ENST00000443711 GRAMD2AQ8IUY3 354 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 ZNF440Q8IYI8 595 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 CLIP4Q8N3C7 705 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 SMYD1Q8NB12 490 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 OR52E4Q8NGH9 312 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 B4GALNT2Q8NHY0 566 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 LZICQ8WZA0 190 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 CNOT9Q92600 299 aaKnown RBP14.4□□□□□ -0.1
USP40-206ENST00000443711 DTNBP1Q96EV8 351 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 UBL7Q96S82 380 aaPredicted RBP14.4□□□□□ -0.1
USP40-206ENST00000443711 ZFP64Q9NPA5 681 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 DCAF13Q9NV06 445 aaKnown RBP14.4□□□□□ -0.1
USP40-206ENST00000443711 SLC7A8Q9UHI5 535 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 CARD8Q9Y2G2 431 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 HEATR5AQ86XA9 2040 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 LAMA5O15230 3695 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 PINLYPA6NC86 204 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 ERICH4A6NGS2 130 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 SYT5O00445 386 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 ACOT8O14734 319 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 RRP9O43818 475 aaKnown RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 CBR3O75828 277 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 CIB2O75838 187 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 CYP7B1O75881 506 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 RASAL1O95294 804 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 ZNF682O95780 498 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 UBTFL6P0CB48 400 aaPredicted RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 CD247P20963 164 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 P2RX1P51575 399 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 PLGLB1Q02325 96 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 ZNF117Q03924 483 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 FOXO1Q12778 655 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 KLRB1Q12918 225 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 INPP5JQ15735 1006 aaPredicted RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 INAQ16352 499 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 DUSP7Q16829 419 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 NADK2Q4G0N4 442 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 MTX3Q5HYI7 312 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 LCN8Q6JVE9 175 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 PCSK4Q6UW60 755 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 CYP2R1Q6VVX0 501 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 CBLL1Q75N03 491 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 SPPL2CQ8IUH8 684 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 WDSUB1Q8N9V3 476 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 ZFP62Q8NB50 900 aaPredicted RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 FAM71CQ8NEG0 241 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 TOR1AIP2Q8NFQ8 470 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 OR2M3Q8NG83 312 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 GPR32P1Q8NGA4 272 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 PROX1Q92786 737 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 POP5Q969H6 163 aaKnown RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 SLC35B4Q969S0 331 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 SH3YL1Q96HL8 342 aaPredicted RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 TPD52L3Q96J77 140 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 LRGUKQ96M69 825 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 RAB3IPQ96QF0 476 aaPredicted RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 RSPO3Q9BXY4 272 aaPredicted RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 TRIM15Q9C019 465 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 DSN1Q9H410 356 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 PTGES2Q9H7Z7 377 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 EXOSC3Q9NQT5 275 aaKnown RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 RLIMQ9NVW2 624 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 DNAJB12Q9NXW2 375 aaKnown RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 MED11Q9P086 117 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 SAMD4AQ9UPU9 718 aaKnown RBP14.39□□□□□ -0.11
USP40-206ENST00000443711 POMPQ9Y244 141 aa14.39□□□□□ -0.11
USP40-206ENST00000443711 TLN1Q9Y490 2541 aaKnown RBP14.38□□□□□ -0.11
USP40-206ENST00000443711 LRRC3CA6NJW4 275 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 OIP5O43482 229 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 LGI1O95970 557 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 FESP07332 822 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 SUMO3P55854 103 aaPredicted RBP14.38□□□□□ -0.11
USP40-206ENST00000443711 SKP2Q13309 424 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 HYAL4Q2M3T9 481 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 NDUFAF6Q330K2 333 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 GLIPR1L2Q4G1C9 344 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 ZNF550Q7Z398 422 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 TMCO5AQ8N6Q1 288 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 FADS6Q8N9I5 356 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 OR5W2Q8NH69 310 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 GNRHR2Q96P88 292 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 OLAHQ9NV23 265 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 B4GALT7Q9UBV7 327 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 ICAM5Q9UMF0 924 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 CHST2Q9Y4C5 530 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 FREM3P0C091 2139 aa14.38□□□□□ -0.11
USP40-206ENST00000443711 ANKUB1A6NFN9 424 aa14.37□□□□□ -0.11
USP40-206ENST00000443711 C17orf51A8MQB3 221 aa14.37□□□□□ -0.11
USP40-206ENST00000443711 ACOT7O00154 380 aa14.37□□□□□ -0.11
USP40-206ENST00000443711 ATXN7O15265 892 aaPredicted RBP14.37□□□□□ -0.11
USP40-206ENST00000443711 BCAS1O75363 584 aaPredicted RBP14.37□□□□□ -0.11
USP40-206ENST00000443711 ATP6V1B2P21281 511 aa14.37□□□□□ -0.11
USP40-206ENST00000443711 SLC6A8P48029 635 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms