RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 HSD17B11Q8NBQ5 300 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 SEMA6DQ8NFY4 1073 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 CREB3L1Q96BA8 519 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 MCRIP2Q9BUT9 160 aaKnown RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 BEX2Q9BXY8 128 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 PCYOX1Q9UHG3 505 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 NXT1Q9UKK6 140 aaKnown RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 A8MU76 341 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 GOSR2O14653 212 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 ADAM10O14672 748 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 KIAA0513O60268 411 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 TGFB1P01137 390 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 AMY2AP04746 511 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 AMY2BP19961 511 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 CALCRP30988 508 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 APOFQ13790 326 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 GJB7Q6PEY0 223 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 UNQ6494/PRO21346Q6UXR6 183 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF836Q6ZNA1 936 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF571Q7Z3V5 609 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 NECAP1Q8NC96 275 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 OTUB1Q96FW1 271 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 MSTO1Q9BUK6 570 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 NPLQ9BXD5 320 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 RAB34Q9BZG1 259 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 TPSD1Q9BZJ3 242 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 TLE6Q9H808 572 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 MTHFD2LQ9H903 347 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 ING3Q9NXR8 418 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 SERTAD3Q9UJW9 196 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 SLCO1B1Q9Y6L6 691 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 C2orf71A6NGG8 1288 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 RFXANKO14593 260 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 SULT1C4O75897 302 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 AQP8O94778 261 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 ANXA3P12429 323 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 ERP29P30040 261 aaKnown RBP9.77□□□□□ -0.84
SYNE2-206ENST00000441438 JAG1P78504 1218 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 TLE1Q04724 770 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 TNXAQ16473 311 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 ZBED5Q49AG3 693 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 AGAP7PQ5VUJ5 663 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 ABLIM2Q6H8Q1 611 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 SORCS1Q8WY21 1168 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 LHX4Q969G2 390 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 C20orf24Q9BUV8 137 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 OR10A5Q9H207 317 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 WDR41Q9HAD4 459 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 CLDND1Q9NY35 253 aa9.77□□□□□ -0.84
SYNE2-206ENST00000441438 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-206ENST00000441438 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-206ENST00000441438 LNP1A1A4G5 178 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 HACD1B0YJ81 288 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 G3V2T6 193 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 ZBTB5O15062 677 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 GSTA4O15217 222 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 HLA-DOAP06340 250 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 THBDP07204 575 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 ST6GAL1P15907 406 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 HLA-GP17693 338 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 SLC6A4P31645 630 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 RAB31Q13636 194 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 ZNF699Q32M78 642 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 RHBDD2Q6NTF9 364 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 SVOPLQ8N434 492 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 DLG3Q92796 817 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 TNFRSF13CQ96RJ3 184 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 RSG1Q9BU20 258 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 WRAP53Q9BUR4 548 aaKnown RBP9.77□□□□□ -0.85
SYNE2-206ENST00000441438 ELOVL1Q9BW60 279 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 FGFR1OP2Q9NVK5 253 aa9.77□□□□□ -0.85
SYNE2-206ENST00000441438 NKX1-2Q9UD57 310 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-206ENST00000441438 K7EP13 123 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR2F2O95006 317 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 HTR1AP08908 422 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 RAB40ALP0C0E4 278 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 H2AFZP0C0S5 128 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SNHG28P0DPA3 235 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SRFP11831 508 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ZNF25P17030 456 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ARNTP27540 789 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CD68P34810 354 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 KIR2DL1P43626 348 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 GALCP54803 685 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 AESQ08117 197 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 DPY19L1Q2PZI1 675 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ASPRV1Q53RT3 343 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 PRAMEF18Q5VWM3 479 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR52W1Q6IF63 320 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SLC8B1Q6J4K2 584 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 RBMS3Q6XE24 437 aaKnown RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 H2AFVQ71UI9 128 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CADM2Q8N3J6 435 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 NXNL1Q96CM4 212 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 DNAJC19Q96DA6 116 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CPNE2Q96FN4 548 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms