RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 GJD3Q8N144 294 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 OR6M1Q8NGM8 313 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 OR56B4Q8NH76 319 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 LGALS14Q8TCE9 139 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ACOT11Q8WXI4 607 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 FBXW5Q969U6 566 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 MS4A3Q96HJ5 214 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 GPR137Q96N19 417 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ZNF558Q96NG5 402 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 UBQLN3Q9H347 655 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 MCCC2Q9HCC0 563 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 COPZ2Q9P299 210 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 SIRT4Q9Y6E7 314 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 PTPRDP23468 1912 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TCRBV16S1A1N1A0A5B0 115 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 MEIS3P1A6NDR6 274 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 GLTPD2A6NH11 291 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 FAM171A2A8MVW0 826 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 PDCD5O14737 125 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 KIAA0355O15063 1070 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 FCMRO60667 390 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 B4GALT2O60909 372 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 MPC2O95563 127 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 MPIP34949 423 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 HTR4Q13639 388 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 LTB4RQ15722 352 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 C4orf46Q504U0 113 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 HSD17B12Q53GQ0 312 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 PLA1AQ53H76 456 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 SFRP5Q5T4F7 317 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 GPR139Q6DWJ6 353 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TMEM81Q6P7N7 255 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 GAREM2Q75VX8 874 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 UBE2Q1Q7Z7E8 422 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 KIAA0907Q7Z7F0 614 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 PLA2G15Q8NCC3 412 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 OR8S1Q8NH09 359 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 AMDHD1Q96NU7 426 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 DLL4Q9NR61 685 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ASB6Q9NWX5 421 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 MED11Q9P086 117 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 SERTM1A2A2V5 107 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 CDHR4A6H8M9 788 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 FAM25EA8MYX2 175 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 SURF4O15260 269 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ARL6IP5O75915 188 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 PPP1R3DO95685 299 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 RPN2P04844 631 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 NPR2P20594 1047 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TRHRP34981 398 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 GBX2P52951 348 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 AP3S2P59780 193 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ZNF805Q5CZA5 627 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TMEM69Q5SWH9 247 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 HENMT1Q5T8I9 393 aaKnown RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 SLC22A10Q63ZE4 541 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 OR4C11Q6IEV9 310 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 C17orf99Q6UX52 265 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 FAM83HQ6ZRV2 1179 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 TMED4Q7Z7H5 227 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 RANBP3LQ86VV4 465 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 DCUN1D3Q8IWE4 304 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ARL14Q8N4G2 192 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 C17orf47Q8NEP4 570 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 OR52N1Q8NH53 320 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 CXorf58Q96LI9 332 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 RBP7Q96R05 134 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 PDCD10Q9BUL8 212 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TM7SF3Q9NS93 570 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 AKAP7Q9P0M2 348 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 HS3ST2Q9Y278 367 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 BACE2Q9Y5Z0 518 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ALPK2Q86TB3 2170 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 A0A1B0GW55 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 A0A1W2PS29 197 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ANKRD61A6NGH8 418 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ACOD1A6NK06 481 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 CSN2P05814 226 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 C8AP07357 584 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4L2P0CJ85 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4L3P0CJ86 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4L4P0CJ87 422 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4L5P0CJ88 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4L6P0CJ89 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4L7P0CJ90 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TBXA2RP21731 343 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 RAD52P43351 418 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 METAP1P53582 386 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 GMFBP60983 142 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TPGS2Q68CL5 300 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ASTLQ6HA08 431 aaPredicted RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 MEPCEQ7L2J0 689 aaKnown RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 LIX1LQ8IVB5 337 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 OR13C2Q8NGS9 318 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 OR4K13Q8NH42 304 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 THAP4Q8WY91 577 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms