RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 TRIM44Q96DX7 344 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 OTUB1Q96FW1 271 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ADGRG7Q96K78 797 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ACTRT3Q9BYD9 372 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ACTR6Q9GZN1 396 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 OR10A4Q9H209 315 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 TUBB1Q9H4B7 451 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 NGBQ9NPG2 151 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 GIN1Q9NXP7 522 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ATP6V1HQ9UI12 483 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 A0A0J9YW62 118 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ZNF195O14628 629 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 SCAMP2O15127 329 aaKnown RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 CFLARO15519 480 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 TMCC2O75069 709 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 LYPLA1O75608 230 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 LY6G6DO95868 133 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 IL32P24001 234 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ELK4P28324 431 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 CCT3P49368 545 aaKnown RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 P2RX1P51575 399 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 IFFO1Q0D2I5 559 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 CTU2Q2VPK5 515 aaKnown RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ARL13AQ5H913 290 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 CDC73Q6P1J9 531 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ZAR1Q86SH2 424 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 FNDC5Q8NAU1 212 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ATP6V1C2Q8NEY4 427 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 AGR3Q8TD06 166 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ROBO4Q8WZ75 1007 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 CDS1Q92903 461 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 MOAP1Q96BY2 351 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 APOPT1Q96IL0 206 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 COX4I2Q96KJ9 171 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 MARK4Q96L34 752 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 FBXO34Q9NWN3 711 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 GPC6Q9Y625 555 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ITPR3Q14573 2671 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 NF1P21359 2839 aa12.1□□□□□ -0.47
GARNL3-206ENST00000439286 ARHGAP21Q5T5U3 1957 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 KLF4O43474 513 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 PRKD3O94806 890 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 THBDP07204 575 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 CHRNGP07510 517 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 PSMB1P20618 241 aaKnown RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 PSMA4P25789 261 aaKnown RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 AGTR1P30556 359 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 SLC7A1P30825 629 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 PTH2RP49190 550 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 SUMO3P55854 103 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 FOXF1Q12946 379 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 CD226Q15762 336 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 TMEM176BQ3YBM2 270 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 SLC43A2Q8N370 569 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 ZNF614Q8N883 585 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 TOR1AIP2Q8NFQ8 470 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 OR7A2PQ8NGA2 310 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 FBXO27Q8NI29 283 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 POC1BQ8TC44 478 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
GARNL3-206ENST00000439286 CARD8Q9Y2G2 431 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 KIAA1549Q9HCM3 1950 aa12.09□□□□□ -0.47
GARNL3-206ENST00000439286 MTORP42345 2549 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 TRIM64A6NGJ6 449 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 TRIM64BA6NI03 449 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 DUXAA6NLW8 204 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 TMEM233B4DJY2 109 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 HS3ST1O14792 307 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 CNOT4O95628 575 aaKnown RBP12.08□□□□□ -0.48
GARNL3-206ENST00000439286 FESP07332 822 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 LAMP1P11279 417 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 SOAT1P35610 550 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 SERPINB5P36952 375 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 ATP12AP54707 1039 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 ATP5J2P56134 94 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 ZNF117Q03924 483 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-206ENST00000439286 CAPRIN1Q14444 709 aaKnown RBP12.08□□□□□ -0.48
GARNL3-206ENST00000439286 ZNF239Q16600 458 aaKnown RBP12.08□□□□□ -0.48
GARNL3-206ENST00000439286 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 KLHL26Q53HC5 615 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 DCST2Q5T1A1 773 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 IL23RQ5VWK5 629 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 FCRLAQ7L513 359 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 ZNF611Q8N823 705 aa12.08□□□□□ -0.48
GARNL3-206ENST00000439286 BANPQ8N9N5 519 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms