RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DUSP5Q16690 384 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 YIF1BQ5BJH7 314 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 PRAMEF8Q5VWM4 474 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 PRAMEF7Q5VXH5 474 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC30A6Q6NXT4 461 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 LINC00471Q8N535 108 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 CCDC3Q9BQI4 270 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SRRQ9GZT4 340 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 C11orf54Q9H0W9 315 aaPredicted RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 CALML5Q9NZT1 146 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SPTBP11277 2137 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 HMX3A6NHT5 357 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PIP5K1CO60331 668 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PIAS2O75928 621 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PROS1P07225 676 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 GSTM3P21266 225 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 HTR2BP41595 481 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PPM1FP49593 454 aaPredicted RBP12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 SNRPD2P62316 118 aaKnown RBP12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 ST3GAL3Q11203 375 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 GPR68Q15743 365 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 OR2G6Q5TZ20 316 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF655Q8N720 491 aaPredicted RBP12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 C19orf47Q8N9M1 422 aaKnown RBP12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 TMEM255BQ8WV15 326 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 ARSGQ96EG1 525 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 MCHR1Q99705 422 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 KLHL28Q9NXS3 571 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 GRIP1Q9Y3R0 1128 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 WDR45Q9Y484 360 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 A0A1B0GVT2 93 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 OR6C70A6NIJ9 312 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC9B1P1A6NJY1 282 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 MEN1O00255 615 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 RAB36O95755 333 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 THY1P04216 161 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 CTSBP07858 339 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 GNSP15586 552 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 CRYBB2P43320 205 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 FNTBP49356 437 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 P2RX3P56373 397 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 UCK1Q9HA47 277 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 ABCB9Q9NP78 766 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 PHF11Q9UIL8 331 aa12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF443Q9Y2A4 671 aaPredicted RBP12.89□□□□□ -0.35
PTCHD3-201ENST00000438700 LILRA5A6NI73 299 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 PLD2O14939 933 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 AKR7A2O43488 359 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 PRKAR1BP31321 381 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 OMPP47874 163 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 EFNB1P98172 346 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 TYW3Q6IPR3 259 aaKnown RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 CDC73Q6P1J9 531 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 C17orf82Q86X59 251 aaPredicted RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 PHC2Q8IXK0 858 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 PIGXQ8TBF5 258 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 TMEM163Q8TC26 289 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 GNPDA2Q8TDQ7 276 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 FGF11Q92914 225 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 RNFT2Q96EX2 444 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 MAP3K3Q99759 626 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 NDUFB11Q9NX14 153 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 TESQ9UGI8 421 aaKnown RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 DIMT1Q9UNQ2 313 aaKnown RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 A0A075B6Q4 140 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 NPIPA5A0A0B4J1W7 369 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 DUXAA6NLW8 204 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 B4DXG7 233 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 NPIPA7E9PJI5 369 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 ICMTO60725 284 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 NPIPA8P0DM63 369 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 CPMP14384 443 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 MYL12AP19105 171 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 TLX1P31314 330 aaPredicted RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 SOX18P35713 384 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 IFNGR2P38484 337 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 PSPHP78330 225 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 TSPAN31Q12999 210 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 FLYWCH1Q4VC44 716 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 C14orf28Q4W4Y0 310 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 HEPHL1Q6MZM0 1159 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 FAM131AQ6UXB0 335 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF836Q6ZNA1 936 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 GDF7Q7Z4P5 450 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 OR2L13Q8N349 312 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 TMEM52Q8NDY8 209 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms