RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FXYD4P59646 89 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 RPS15AP62244 130 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC14A1Q13336 389 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 BCL7AQ4VC05 210 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 BTNL8Q6UX41 500 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PCED1AQ9H1Q7 454 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 IL20RAQ9UHF4 553 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 NDUFB2O95178 105 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TK1P04183 234 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SOX3P41225 446 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SELENOWP63302 87 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 STK11Q15831 433 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TPGS2Q68CL5 300 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 METTL2AQ96IZ6 378 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 KCNA7Q96RP8 456 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 ACKR4Q9NPB9 350 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 GMPR2Q9P2T1 348 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 AK6Q9Y3D8 172 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 MEGF6O75095 1541 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF318Q5VUA4 2279 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 A0A087WUU8 490 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 WASH4PA8MWX3 477 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 B4DXG7 233 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 C11orf98E9PRG8 122 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 ADORA3P0DMS8 318 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 GABRA3P34903 492 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 NPBWR1P48145 328 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 EFNA3P52797 238 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 FOXK1P85037 733 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 ATPAF1Q5TC12 328 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 GKN2Q86XP6 184 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC2A13Q96QE2 648 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 UBL7Q96S82 380 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC25A21Q9BQT8 299 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SIX2Q9NPC8 291 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PCDHA9Q9Y5H5 950 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 RTTNQ86VV8 2226 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 CAPNS1P04632 268 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PSMB1P20618 241 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 HLA-FP30511 346 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TNFSF8P32971 234 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 CLDN6P56747 220 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 FKBP1BP68106 108 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 MAP2K5Q13163 448 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 GRIK5Q16478 980 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TIPARPQ7Z3E1 657 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TTTY10Q9BZA0 68 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 MED17Q9NVC6 651 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 HIF1ANQ9NWT6 349 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 YKT6O15498 198 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 GPR39O43194 453 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 FOLR1P15328 257 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 GLO1Q04760 184 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 BAMBIQ13145 260 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 MS4A13Q5J8X5 152 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 APOBEC3HQ6NTF7 200 aaKnown RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 OR1S2Q8NGQ3 325 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 RNF150Q9ULK6 438 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 KLK4Q9Y5K2 254 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 GPRIN2O60269 458 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 FZD7O75084 574 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 DLX2Q07687 328 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 PDZK1IP1Q13113 114 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 UGCGQ16739 394 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 HBMQ6B0K9 141 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 TRAPPC6BQ86SZ2 158 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 OR51A7Q8NH64 312 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 SDSLQ96GA7 329 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 LMF1Q96S06 567 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 DPEP3Q9H4B8 488 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 SPO11Q9Y5K1 396 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 METTL15A6NJ78 407 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 CRHBPP24387 322 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 HLA-DMAP28067 261 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 CEACAM7Q14002 265 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 GGHQ92820 318 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 DAZLQ92904 295 aaKnown RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 PRRC1Q96M27 445 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 NTPCRQ9BSD7 190 aaKnown RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 MED18Q9BUE0 208 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 NSUN3Q9H649 340 aaKnown RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 MAFBQ9Y5Q3 323 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 UBL3O95164 117 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 ITGB2P05107 769 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 MMP3P08254 477 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 CD52P31358 61 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 SORDQ00796 357 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 PAGE3Q5JUK9 113 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 ALKAL2Q6UX46 152 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 PHYHIPQ92561 330 aa10.9□□□□□ -0.66
PTCH1-209ENST00000437951 TFGQ92734 400 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-209ENST00000437951 ST6GALNAC5Q9BVH7 336 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms