RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C17orf105B2RV13 164 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 KDM4EB2RXH2 506 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-216ENST00000437340 CDC42EP2O14613 210 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 CHP2O43745 196 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 HMGN1P05114 100 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 PNLIPP16233 465 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 GADD45AP24522 165 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 PGGHGQ32M88 737 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 CLEC12AQ5QGZ9 265 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ZNF550Q7Z398 422 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 BMP8AQ7Z5Y6 402 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ZNF614Q8N883 585 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 LSMEM1Q8N8F7 131 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 OR2T33Q8NG76 320 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ZHX1-C8orf76Q96EF9 292 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 NDC1Q9BTX1 674 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 SERTAD3Q9UJW9 196 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 OR10H1Q9Y4A9 318 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ADAMTS9Q9P2N4 1935 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 IGKV3D-11A0A0A0MRZ8 115 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 TOX3O15405 576 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-216ENST00000437340 RAB36O95755 333 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 AVPR2P30518 371 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ACAA2P42765 397 aaKnown RBP23.73■■□□□ 1.39
CPNE1-216ENST00000437340 OR1D4P47884 311 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 MLLT10P55197 1068 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 RAB40BQ12829 278 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 TIMM50Q3ZCQ8 353 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 MINDY4Q4G0A6 757 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 RPL13AP3Q6NVV1 102 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 TMPRSS11FQ6ZWK6 438 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 CDK20Q8IZL9 346 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 NANOGP1Q8N7R0 232 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 BCORP1Q8N888 145 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ANKK1Q8NFD2 765 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 OR4Q3Q8NH05 313 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 PTPMT1Q8WUK0 201 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-216ENST00000437340 ZNF768Q9H5H4 540 aaKnown RBP23.73■■□□□ 1.39
CPNE1-216ENST00000437340 SIDT1Q9NXL6 827 aaKnown RBP23.73■■□□□ 1.39
CPNE1-216ENST00000437340 SUSD2Q9UGT4 822 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 MED31Q9Y3C7 131 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 SURF4O15260 269 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 DYRK3O43781 588 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 HSMCR30P0CW71 290 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 FOLR1P15328 257 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 EPHA8P29322 1005 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-216ENST00000437340 CTBP2P56545 445 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 SNAP47Q5SQN1 464 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 SLC34A3Q8N130 599 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 OR52I1Q8NGK6 324 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 PIGKQ92643 395 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 SENP5Q96HI0 755 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-216ENST00000437340 ZC3H10Q96K80 434 aaKnown RBP23.72■■□□□ 1.39
CPNE1-216ENST00000437340 YIPF2Q9BWQ6 316 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 CFL2Q9Y281 166 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 PCDHGA3Q9Y5H0 932 aa23.72■■□□□ 1.39
CPNE1-216ENST00000437340 CCRL2O00421 344 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 DSCR3O14972 297 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 SCG5P05408 212 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 SP9P0CG40 484 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 IFI30P13284 250 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 RBM34P42696 430 aaKnown RBP23.71■■□□□ 1.39
CPNE1-216ENST00000437340 RNF144AP50876 292 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-216ENST00000437340 BMXP51813 675 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 LIMK1P53667 647 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.71■■□□□ 1.39
CPNE1-216ENST00000437340 C3orf38Q5JPI3 329 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 SLC30A6Q6NXT4 461 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 RFKQ969G6 155 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 PLEKHA8Q96JA3 519 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 FGF20Q9NP95 211 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-216ENST00000437340 OSGIN1Q9UJX0 560 aa23.71■■□□□ 1.39
CPNE1-216ENST00000437340 NADKO95544 446 aaPredicted RBP23.7■■□□□ 1.39
CPNE1-216ENST00000437340 GAS1P54826 345 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 SQSTM1Q13501 440 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 SPHARQ15513 63 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 USP43Q70EL4 1123 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 CCDC74AQ96AQ1 378 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 SLC46A1Q96NT5 459 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 ZNF426Q9BUY5 554 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 TAPBPLQ9BX59 468 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 DPH1Q9BZG8 443 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 DCSTAMPQ9H295 470 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 ZNF304Q9HCX3 659 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 PALMDQ9NP74 551 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 FLRT3Q9NZU0 649 aa23.7■■□□□ 1.39
CPNE1-216ENST00000437340 DHCR7Q9UBM7 475 aaKnown RBP23.7■■□□□ 1.39
CPNE1-216ENST00000437340 A0A1B0GWA3 101 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 RCBTB2O95199 551 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 MAKP20794 623 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 C1DQ13901 141 aaKnown RBP23.7■■□□□ 1.38
CPNE1-216ENST00000437340 ANGPT1Q15389 498 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 ZNF528Q3MIS6 628 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 KANSL1Q7Z3B3 1105 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 ADCK1Q86TW2 530 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 TMEM151BQ8IW70 566 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 PFN4Q8NHR9 129 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 RNF217Q8TC41 542 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-216ENST00000437340 ZNF501Q96CX3 271 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms